RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 THY1P04216 161 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 OR9G1Q8NH87 305 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 CHAC1Q9BUX1 264 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 HEATR5BQ9P2D3 2071 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 TRBV20-1A0A075B6N2 111 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 C9JAW5 83 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 OR5P3Q8WZ94 311 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 NKX2-8O15522 239 aa11.02□□□□□ -0.64
PCDHGA3-201ENST00000253812 GATA2P23769 480 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA3-201ENST00000253812 SLAQ13239 276 aa11.02□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.64
PCDHGA3-201ENST00000253812 LCTP09848 1927 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 K7EP34 96 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 MMP23AO75900 390 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 FAM106CPP0CH98 169 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 ZC2HC1BQ5TFG8 222 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 TOMM7Q9P0U1 55 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 IGHV2OR16-5A0A0B4J2B6 119 aa11.02□□□□□ -0.65
PCDHGA3-201ENST00000253812 CD55P08174 381 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 CCL8P80075 99 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 DEPPQ9NTK1 212 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 GNG5P63218 68 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 APOBEC4Q8WW27 367 aaKnown RBP11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 C4orf51C9J302 202 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 IFNL4K9M1U5 179 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 CTSBP07858 339 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 EGR4Q05215 589 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 TMEM190Q8WZ59 177 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 VWCEQ96DN2 955 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 RAX2Q96IS3 184 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 LOC101059948A0A1B0GTJ6 334 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 J3QW42 95 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 FAM90A2PQ658T7 463 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 FAM89BQ8N5H3 189 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 ITLN1Q8WWA0 313 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 PILRBQ9UKJ0 227 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 GPR179Q6PRD1 2367 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 ABCA4P78363 2273 aa11.01□□□□□ -0.65
PCDHGA3-201ENST00000253812 F2Z2F3 143 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 RPL39P5Q59GN2 51 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 FHL5Q5TD97 284 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 LHFPL1Q86WI0 220 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 LEAP2Q969E1 77 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 KLHDC3Q9BQ90 382 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 HEATR1Q9H583 2144 aaKnown RBP11□□□□□ -0.65
PCDHGA3-201ENST00000253812 TMEM8BA6NDV4 472 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 UCNP55089 124 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 ABHD17AQ96GS6 310 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 PSG8Q9UQ74 426 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 KLF2Q9Y5W3 355 aaPredicted RBP11□□□□□ -0.65
PCDHGA3-201ENST00000253812 B5MCH6 92 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 SPTBN1Q01082 2364 aaKnown RBP11□□□□□ -0.65
PCDHGA3-201ENST00000253812 PFN1P07737 140 aaKnown RBP11□□□□□ -0.65
PCDHGA3-201ENST00000253812 CT83Q5H943 113 aa11□□□□□ -0.65
PCDHGA3-201ENST00000253812 SEPSECSQ9HD40 501 aaKnown RBP11□□□□□ -0.65
PCDHGA3-201ENST00000253812 SELLP14151 372 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 SDK2Q58EX2 2172 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 PF4V1P10720 104 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 SUPT4H1P63272 117 aaKnown RBP10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 LAGE3Q14657 143 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 TMEM74BQ9NUR3 256 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 PSME4Q14997 1843 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 CDKN1AP38936 164 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 MESP1Q9BRJ9 268 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 IGKV1D-13A0A0B4J2D9 117 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 SAA1P0DJI8 122 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 IGKV1-13P0DP09 117 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 STPG1Q5TH74 334 aa10.99□□□□□ -0.65
PCDHGA3-201ENST00000253812 SMIM20Q8N5G0 67 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 SNRPD3P62318 126 aaKnown RBP10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 PMVKQ15126 192 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 C9JQL5 133 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 J3QRE1 110 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 TRACP01848 142 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 PPP1R27Q86WC6 154 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 CSTL1Q9H114 145 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
PCDHGA3-201ENST00000253812 D6R8Y8 96 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 PYYP10082 97 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 MST1LQ2TV78 715 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 STPG4Q8N801 248 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 SCARF2Q96GP6 870 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 SCN2AQ99250 2005 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 A0A1W2PR77 199 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 IGHV3-35A0A0C4DH35 117 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 PAX1P15863 534 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 PAQR4Q8N4S7 273 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 OVOL2Q9BRP0 275 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 DOCK9Q9BZ29 2069 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 C21orf140B9A014 251 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 CELA2AP08217 269 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 PRR7Q8TB68 274 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms