RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KLK11Q9UBX7 282 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 MTFP1Q9UDX5 166 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 X6R8D5 127 aa7.47□□□□□ -1.21
VPS50-201ENST00000251739 C3orf85A0A1B0GTC6 90 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 A0A1W2PS18 150 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 C11orf94C9JXX5 98 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 DNASE2O00115 360 aaPredicted RBP7.46□□□□□ -1.22
VPS50-201ENST00000251739 CD74P04233 296 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 HNRNPCP07910 306 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS50-201ENST00000251739 SPP1P10451 314 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 MIFP14174 115 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 PGAM2P15259 253 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 NPPCP23582 126 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 ETV6P41212 452 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 STHQ8IWL8 128 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 CSNK1G2-AS1Q8NCQ2 148 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 OR4D10Q8NGI6 311 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 METTL26Q96S19 204 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 RABAC1Q9UI14 185 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 PRELID1Q9Y255 219 aa7.46□□□□□ -1.22
VPS50-201ENST00000251739 DYNC1H1Q14204 4646 aaKnown RBP7.46□□□□□ -1.22
VPS50-201ENST00000251739 B3GALNT1O75752 331 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 ATG12O94817 140 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 CDS2O95674 445 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 IFNA17P01571 189 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 ZNF688P0C7X2 276 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 IGLC1P0CG04 106 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 S100A5P33763 92 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 OPRK1P41145 380 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 HOXA1P49639 335 aaPredicted RBP7.45□□□□□ -1.22
VPS50-201ENST00000251739 SUB1P53999 127 aaKnown RBP eCLIP7.45□□□□□ -1.22
VPS50-201ENST00000251739 SP6Q3SY56 376 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 TIGITQ495A1 244 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 PRSS54Q6PEW0 395 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
VPS50-201ENST00000251739 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 STXBP6Q8NFX7 210 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 OR13C8Q8NGS7 320 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 OR52E5Q8NH55 327 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 TERB2Q8NHR7 220 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 LHFPL5Q8TAF8 219 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 TMEM170AQ8WVE7 144 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 GLMPQ8WWB7 406 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 ABHD1Q96SE0 405 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 TMEM222Q9H0R3 208 aa7.45□□□□□ -1.22
VPS50-201ENST00000251739 KNCNA6PVL3 124 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 GABARAPO95166 117 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 HLA-DMBP28068 263 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 SPCS3P61009 180 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 RPL11P62913 178 aaKnown RBP7.44□□□□□ -1.22
VPS50-201ENST00000251739 CTF1Q16619 201 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 TRIM16LQ309B1 348 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 RNASE12Q5GAN4 147 aaKnown RBP7.44□□□□□ -1.22
VPS50-201ENST00000251739 Q6ZTC4 211 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 CCDC71LQ8N9Z2 235 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 GLYATL2Q8WU03 294 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 PDCD10Q9BUL8 212 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 NAA50Q9GZZ1 169 aaKnown RBP7.44□□□□□ -1.22
VPS50-201ENST00000251739 COPZ2Q9P299 210 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 MUC4Q99102 2169 aa7.44□□□□□ -1.22
VPS50-201ENST00000251739 TRAV30A0A087WSZ9 112 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 IGLL5B9A064 214 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 AMBPP02760 352 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 HTR2BP41595 481 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 RORCP51449 518 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 YPEL3P61236 119 aaPredicted RBP7.43□□□□□ -1.22
VPS50-201ENST00000251739 SPCS2Q15005 226 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 C2orf83Q53S99 150 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 C16orf54Q6UWD8 224 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 TMEM229BQ8NBD8 167 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 OR1S2Q8NGQ3 325 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 ZFAND1Q8TCF1 268 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 MARCH1Q8TCQ1 289 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 RNASEH2CQ8TDP1 164 aaKnown RBP7.43□□□□□ -1.22
VPS50-201ENST00000251739 RRNAD1Q96FB5 475 aaKnown RBP7.43□□□□□ -1.22
VPS50-201ENST00000251739 MIXL1Q9H2W2 232 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 SEPSECSQ9HD40 501 aaKnown RBP7.43□□□□□ -1.22
VPS50-201ENST00000251739 EXTL2Q9UBQ6 330 aa7.43□□□□□ -1.22
VPS50-201ENST00000251739 IGHV4-4A0A075B6R2 117 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 TRAV10A0A0B4J240 114 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 RPS10-NUDT3A0A1W2PQS6 291 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 HELTA6NFD8 242 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 FAM25AB3EWG3 89 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 FAM25CB3EWG5 89 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 FAM25GB3EWG6 89 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 FAM90A26D6RGX4 464 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 SCGB2A1O75556 95 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 NXPH3O95157 252 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 RAB3DO95716 219 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 OR5AC1P0C628 307 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 MED14OSP0DP75 135 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 SLC25A4P12235 298 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 ZNF182P17025 639 aaPredicted RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 RND2P52198 227 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 TAS2R19P59542 299 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 SRSF3P84103 164 aaKnown RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 SSBP1Q04837 148 aaKnown RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 SURF2Q15527 256 aaPredicted RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 USF2Q15853 346 aaPredicted RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 ACTL10Q5JWF8 245 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms