RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RNF2Q99496 336 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 DPM3Q9P2X0 92 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 ZNF320A2RRD8 509 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 UQCRFS1P47985 274 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 SELENOTP62341 195 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 FOXL1Q12952 345 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 ETFRF1Q6IPR1 90 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 OR1L4Q8NGR5 311 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 GSX1Q9H4S2 264 aaPredicted RBP17.29■□□□□ 0.36
CLN6-201ENST00000249806 A0A1W2PRE2 83 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 SLC17A3O00476 420 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 TYMSP04818 313 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 ORM2P19652 201 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 CENPWQ5EE01 88 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 UNQ6494/PRO21346Q6UXR6 183 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 LINC00305Q7Z4B0 112 aa17.29■□□□□ 0.36
CLN6-201ENST00000249806 F11RQ9Y624 299 aaKnown RBP17.29■□□□□ 0.36
CLN6-201ENST00000249806 MMDQ15546 238 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 IMMP2LQ96T52 175 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 S100A2P29034 98 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 GNG4P50150 75 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 BPIFB3P59826 476 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 LCN2P80188 198 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 TMEM116Q8NCL8 245 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 PAXXQ9BUH6 204 aa17.28■□□□□ 0.36
CLN6-201ENST00000249806 ELOA3CA0A087WX78 387 aaPredicted RBP17.27■□□□□ 0.36
CLN6-201ENST00000249806 FBLN7Q53RD9 439 aa17.27■□□□□ 0.36
CLN6-201ENST00000249806 ACTL10Q5JWF8 245 aa17.27■□□□□ 0.36
CLN6-201ENST00000249806 OR1B1Q8NGR6 318 aa17.27■□□□□ 0.36
CLN6-201ENST00000249806 RNF5Q99942 180 aa17.27■□□□□ 0.36
CLN6-201ENST00000249806 SFTPCP11686 197 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 PRTN3P24158 256 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 OR10D4PQ8NGN7 298 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 CFHR4Q92496 578 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 OR51M1Q9H341 326 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 PITPNC1Q9UKF7 332 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 LY96Q9Y6Y9 160 aa17.27■□□□□ 0.35
CLN6-201ENST00000249806 PKD1L2Q7Z442 2459 aa17.26■□□□□ 0.35
CLN6-201ENST00000249806 PIEZO1Q92508 2521 aa17.26■□□□□ 0.35
CLN6-201ENST00000249806 M0R1W7 72 aa17.26■□□□□ 0.35
CLN6-201ENST00000249806 CNIH1O95406 144 aa17.26■□□□□ 0.35
CLN6-201ENST00000249806 ZFP36P26651 326 aaKnown RBP17.25■□□□□ 0.35
CLN6-201ENST00000249806 PYY3Q5JQD4 70 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 LINC00479Q96M42 142 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 TRGV9Q99603 122 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 UBTD1Q9HAC8 227 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 FABP4P15090 132 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 GPR6P46095 362 aaPredicted RBP17.25■□□□□ 0.35
CLN6-201ENST00000249806 ERVFC1-1P60608 527 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 ITLN2Q8WWU7 325 aaPredicted RBP17.25■□□□□ 0.35
CLN6-201ENST00000249806 C22orf15Q8WYQ4 148 aa17.25■□□□□ 0.35
CLN6-201ENST00000249806 ODF3BA8MYP8 253 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 RPL15P61313 204 aaKnown RBP17.24■□□□□ 0.35
CLN6-201ENST00000249806 SSX2Q16385 188 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 FXYD5Q96DB9 178 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 WNT10AQ9GZT5 417 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 C19orf84I3L1E1 186 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 CORTO00230 105 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 GNLYP22749 145 aa17.24■□□□□ 0.35
CLN6-201ENST00000249806 FAM103A1Q9BTL3 118 aaKnown RBP17.24■□□□□ 0.35
CLN6-201ENST00000249806 SPTAN1Q13813 2472 aaKnown RBP17.24■□□□□ 0.35
CLN6-201ENST00000249806 VPS13CQ709C8 3753 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 XKRY2A2RUG3 117 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 CEACAM3P40198 252 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 RNASE7Q9H1E1 156 aaKnown RBP17.23■□□□□ 0.35
CLN6-201ENST00000249806 NBR2O15453 112 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 HES1Q14469 280 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 VMO1Q7Z5L0 202 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 IL36BQ9NZH7 164 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 TRAPPC1Q9Y5R8 145 aa17.23■□□□□ 0.35
CLN6-201ENST00000249806 COL12A1Q99715 3063 aa17.22■□□□□ 0.35
CLN6-201ENST00000249806 IGLV2-8P01709 118 aa17.22■□□□□ 0.35
CLN6-201ENST00000249806 TMEM183AQ8IXX5 376 aa17.22■□□□□ 0.35
CLN6-201ENST00000249806 DYNAPQ8N1N2 210 aa17.22■□□□□ 0.35
CLN6-201ENST00000249806 V9GYV3 84 aa17.22■□□□□ 0.35
CLN6-201ENST00000249806 I3L2K1 104 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 TIGITQ495A1 244 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 CDPF1Q6NVV7 123 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 PERPQ96FX8 193 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 HIST1H2BLQ99880 126 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 GSN-AS1Q9NRJ2 163 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 RANP62826 216 aaKnown RBP17.21■□□□□ 0.35
CLN6-201ENST00000249806 LEMD1Q68G75 181 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 ZNF329Q86UD4 541 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 NHLRC2Q8NBF2 726 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 BLNKQ8WV28 456 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 IGF2BP2-AS1Q96M15 143 aa17.21■□□□□ 0.35
CLN6-201ENST00000249806 HYPMO75409 117 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 PAX2Q02962 417 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 A6NNC1 897 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 IGLC1P0CG04 106 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 FXYD3Q14802 87 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 NPBQ8NG41 125 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 BTF3L4Q96K17 158 aa17.2■□□□□ 0.34
CLN6-201ENST00000249806 GCGP01275 180 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 FABP1P07148 127 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 MGST1P10620 155 aaKnown RBP17.19■□□□□ 0.34
CLN6-201ENST00000249806 PSG1P11464 419 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 ASPHD1Q5U4P2 390 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 ZFHX3Q15911 3703 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms