RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PDLIM4P50479 330 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 FOXC1Q12948 553 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 CR1LQ2VPA4 569 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 ZNF137PP52743 207 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 HES1Q14469 280 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 TMEM249Q2WGJ8 235 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 WNT10AQ9GZT5 417 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 FNDC4Q9H6D8 234 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 ITGB1BP1O14713 200 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 RPL27AP46776 148 aaKnown RBP10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 AARDQ4LEZ3 155 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 PRR30Q53SZ7 412 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 FAM168AQ92567 244 aa10.22□□□□□ -0.77
RAB3IP-201ENST00000247833 ISLRO14498 428 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 YPEL3P61236 119 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 FAM222BQ8WU58 562 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 RPEQ96AT9 228 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 ZNF503Q96F45 646 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 ONECUT1Q9UBC0 465 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 S4R3C0 116 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 PEX7O00628 323 aa10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 ZNF25P17030 456 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-201ENST00000247833 ARHGAP32A7KAX9 2087 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 A0A1W2PRE2 83 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM178BH3BS89 294 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 CNTFRP26992 372 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 DNLZQ5SXM8 178 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 CYB5R2Q6BCY4 276 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 C11orf52Q96A22 123 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM186Q96B77 213 aa10.21□□□□□ -0.78
RAB3IP-201ENST00000247833 AMY1AP04745 511 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 KIR3DL3Q8N743 410 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 LINC01560Q8TB33 94 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 CACNG8Q8WXS5 425 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 RITA1Q96K30 269 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 SNHG12Q9BXW3 62 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 NDUFA4L2Q9NRX3 87 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 ZNF292O60281 2723 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 MT-ND6P03923 174 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 FOXA3P55318 350 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 POU2AF1Q16633 256 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 RNASE6Q93091 150 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 RNF2Q99496 336 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 NRN1Q9NPD7 142 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 A0A1W2PPI3 338 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 HLA-DQA1P01909 254 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 CD24P25063 80 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 CEACAM8P31997 349 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 CX3CL1P78423 397 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 C1orf194Q5T5A4 169 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 PERPQ96FX8 193 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 C19orf24Q9BVV8 132 aa10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 MRPL32Q9BYC8 188 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-201ENST00000247833 PPOXP50336 477 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 TCF24Q7RTU0 167 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 RALYQ9UKM9 306 aaKnown RBP10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 SPG11Q96JI7 2443 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 TCRBV4S1A1TA0A5B7 111 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 Q56UQ5 140 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 ZNF833PQ6ZTB9 187 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 IGFBPL1Q8WX77 278 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 SLC25A2Q9BXI2 301 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 ATMQ13315 3056 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 NCOR2Q9Y618 2525 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 IGHV1-69-2A0A0G2JMI3 117 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 A6NNC1 897 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 HYPMO75409 117 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 FAM87AP0C7U9 286 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 ASCL2Q99929 193 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 CTSZQ9UBR2 303 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 FBXL7Q9UJT9 491 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
RAB3IP-201ENST00000247833 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 M0R2Z0 102 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 CORTO00230 105 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 CEACAM4O75871 244 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 NBEAP1P0C6P0 100 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 SELENOTP62341 195 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 OR5AN1Q8NGI8 311 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM167AQ8TBQ9 72 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 LY6HO94772 140 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 CSN3P07498 182 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 IGFL3Q6UXB1 125 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 NUDT10Q8NFP7 164 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 NUDT11Q96G61 164 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 PGLYRP4Q96LB8 373 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 CD3EP07766 207 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 MC5RP33032 325 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 SPATA45Q537H7 98 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM177Q53S58 311 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 TEX36Q5VZQ5 186 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 ETFRF1Q6IPR1 90 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms