RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 NBPF19A0A087WUL8 3843 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
SDF2-201ENST00000247020 F8W036 122 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 SFTA3P0C7M3 94 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 MFAP4P55083 255 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 TAS2R45P59539 299 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 ICAM4Q14773 271 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 VN1R17PQ8TDU5 208 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 TXNDC17Q9BRA2 123 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 TMUB1Q9BVT8 246 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 GNG13Q9P2W3 67 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 ZNF90Q03938 601 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 LY6EQ16553 131 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 HAGHQ16775 308 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 ECSCRQ19T08 205 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 Q6YL49 198 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 ATP6V0BQ99437 205 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 TECRQ9NZ01 308 aaKnown RBP11.15□□□□□ -0.62
SDF2-201ENST00000247020 SOX21Q9Y651 276 aaPredicted RBP11.15□□□□□ -0.62
SDF2-201ENST00000247020 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
SDF2-201ENST00000247020 PDZD2O15018 2839 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 H3BUA1 57 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 SPNS3Q6ZMD2 512 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 BCL6BQ8N143 479 aaPredicted RBP11.14□□□□□ -0.63
SDF2-201ENST00000247020 SVBPQ8N300 66 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 RARRES2Q99969 163 aa11.14□□□□□ -0.63
SDF2-201ENST00000247020 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
SDF2-201ENST00000247020 GAR1Q9NY12 217 aaKnown RBP11.14□□□□□ -0.63
SDF2-201ENST00000247020 GCN1Q92616 2671 aaKnown RBP11.14□□□□□ -0.63
SDF2-201ENST00000247020 IGHV3-21A0A0B4J1V1 117 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 C9JQL5 133 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 COX7A2P2O60397 106 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 APOC3P02656 99 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 SRP19P09132 144 aaKnown RBP11.13□□□□□ -0.63
SDF2-201ENST00000247020 GATA2P23769 480 aaPredicted RBP11.13□□□□□ -0.63
SDF2-201ENST00000247020 YPEL3P61236 119 aaPredicted RBP11.13□□□□□ -0.63
SDF2-201ENST00000247020 SUN5Q8TC36 379 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 TMEM37Q8WXS4 190 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 C21orf62Q9NYP8 219 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 CREBBPQ92793 2442 aa11.13□□□□□ -0.63
SDF2-201ENST00000247020 MDFIC2A0A1B0GVS7 189 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 AP4M1O00189 453 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 HMGB3O15347 200 aaKnown RBP11.12□□□□□ -0.63
SDF2-201ENST00000247020 CD5LO43866 347 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 GNG7O60262 68 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 OR2J3O76001 311 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 TOMM40O96008 361 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 C8orf88P0DMB2 117 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 MEF2BQ02080 365 aaPredicted RBP11.12□□□□□ -0.63
SDF2-201ENST00000247020 C10orf113Q5VZT2 155 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
SDF2-201ENST00000247020 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 RXFP4Q8TDU9 374 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
SDF2-201ENST00000247020 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 NDUFB8O95169 186 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 IGKV1-17P01599 117 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 IGHV4-59P01825 116 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 S100A7AQ86SG5 101 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 STXBP6Q8NFX7 210 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 ABCA1O95477 2261 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 LINC01548A6NM66 108 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 SNAPINO95295 136 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 PSG1P11464 419 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 GCHFRP30047 84 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 TIGITQ495A1 244 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 MIR17HGQ75NE6 70 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 TMEM86BQ8N661 226 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 OR51G1Q8NGK1 321 aa11.11□□□□□ -0.63
SDF2-201ENST00000247020 UNC79Q9P2D8 2635 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 SH2D7A6NKC9 451 aaPredicted RBP11.1□□□□□ -0.63
SDF2-201ENST00000247020 F8W735 103 aaPredicted RBP11.1□□□□□ -0.63
SDF2-201ENST00000247020 G3V318 75 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
SDF2-201ENST00000247020 HYPMO75409 117 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 RHOGP84095 191 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 SOHLH1Q5JUK2 328 aa11.1□□□□□ -0.63
SDF2-201ENST00000247020 IQCF2Q8IXL9 164 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms