RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IGHV1-8P0DP01 117 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 CD33P20138 364 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 BPIFB3P59826 476 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 FXYD3Q14802 87 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 WDR73Q6P4I2 378 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 A0A1W2PPI3 338 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 E7EQL1 145 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 SERF1AO75920 110 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 CDKN1AP38936 164 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 COX19Q49B96 90 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 IBA57Q5T440 356 aaKnown RBP17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 OR4B1Q8NGF8 309 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 PAXXQ9BUH6 204 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 TPSG1Q9NRR2 321 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 FSTL3O95633 263 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 COMPP49747 757 aaPredicted RBP17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 SAPCD1Q5SSQ6 148 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 NGBQ9NPG2 151 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 MRPL36Q9P0J6 103 aaKnown RBP17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 CEP250Q9BV73 2442 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 SMIM27A0A1W2PRY6 76 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 PYYP10082 97 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 MGST1P10620 155 aaKnown RBP17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 LGALS7P47929 136 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 TFPI2P48307 235 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 VN1R17PQ8TDU5 208 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 RITA1Q96K30 269 aa17.41■□□□□ 0.38
SH2D3A-201ENST00000245908 COTL1Q14019 142 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 TMEM136Q6ZRR5 245 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 TMEM133Q9H2Q1 129 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 BSNQ9UPA5 3926 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 IGHV3-48P01763 117 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 PVRIGQ6DKI7 326 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 ZNF329Q86UD4 541 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 SSUH2Q9Y2M2 353 aa17.4■□□□□ 0.38
SH2D3A-201ENST00000245908 NAT8BQ9UHF3 227 aa17.39■□□□□ 0.37
SH2D3A-201ENST00000245908 AMMECR1Q9Y4X0 333 aaPredicted RBP17.39■□□□□ 0.37
SH2D3A-201ENST00000245908 NAV3Q8IVL0 2385 aa17.39■□□□□ 0.37
SH2D3A-201ENST00000245908 IGHV1-69-2A0A0G2JMI3 117 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 RBX1P62877 108 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 BAGE3Q86Y29 109 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 BAGE2Q86Y30 109 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 TEX45Q8NA69 505 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 ORAOV1Q8WV07 137 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 FXYD5Q96DB9 178 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 ARFGEF3Q5TH69 2177 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 ANKRD11Q6UB99 2663 aaPredicted RBP17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 IGLC7A0M8Q6 106 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 C20orf202A1L168 122 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 REG1AP05451 166 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 CRYGCP07315 174 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 TCL1AP56279 114 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 SMG1Q96Q15 3661 aaKnown RBP17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 ROS1P08922 2347 aa17.38■□□□□ 0.37
SH2D3A-201ENST00000245908 F2Z2F3 143 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 SPINK4O60575 86 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 AMY1AP04745 511 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 ETFRF1Q6IPR1 90 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 TNFRSF14Q92956 283 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 LINC00479Q96M42 142 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 PEX7O00628 323 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 ENSAO43768 121 aaKnown RBP17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 CTRLP40313 264 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 GNB4Q9HAV0 340 aa17.37■□□□□ 0.37
SH2D3A-201ENST00000245908 IGHV3-72A0A0B4J1Y9 119 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 NBL1P41271 181 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 FAM231DQ6ZW35 169 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 C22orf15Q8WYQ4 148 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 SERTAD4Q9NUC0 356 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 IZUMO1RA6ND01 250 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 C22orf46C9J442 243 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 NDUFB8O95169 186 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 APOBEC3AP31941 199 aaPredicted RBP17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 PRR30Q53SZ7 412 aaPredicted RBP17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 LEMD1Q68G75 181 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 LINC00305Q7Z4B0 112 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 NHLRC2Q8NBF2 726 aa17.36■□□□□ 0.37
SH2D3A-201ENST00000245908 HLA-DQA1P01909 254 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 CRYGBP07316 175 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 MYCNOSP40205 109 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 SLC35B1P78383 322 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 OR10J3Q5JRS4 329 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 SAMD10Q9BYL1 202 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 TNFRSF19Q9NS68 423 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 UQCR10Q9UDW1 63 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 RPL27AP46776 148 aaKnown RBP17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 MFAP2P55001 183 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 MMDQ15546 238 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 Q8N976 141 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 MBD6Q96DN6 1003 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 PERPQ96FX8 193 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 TRGV9Q99603 122 aa17.35■□□□□ 0.37
SH2D3A-201ENST00000245908 IGHV2-26A0A0B4J1V2 119 aa17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 B9A039 149 aa17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 RUSC1-AS1Q66K80 236 aa17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 HCP5Q6MZN7 132 aa17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 STXBP6Q8NFX7 210 aa17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 RNASE8Q8TDE3 154 aaKnown RBP17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 FBXL7Q9UJT9 491 aa17.34■□□□□ 0.37
SH2D3A-201ENST00000245908 MOSP00540 346 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms