RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 C15orf62A8K5M9 175 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 ZNF146Q15072 292 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 PRR31Q5SQ13 230 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 Q6P435 159 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 Q6ZWC4 215 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 LINC00473A8K010 186 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 RBFOX2O43251 390 aaKnown RBP eCLIP7.66□□□□□ -1.18
COL21A1-201ENST00000244728 SMIM17P0DL12 118 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 SFTPCP11686 197 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 DUTP33316 252 aaKnown RBP7.66□□□□□ -1.18
COL21A1-201ENST00000244728 FAM53AQ6NSI3 398 aaPredicted RBP7.66□□□□□ -1.18
COL21A1-201ENST00000244728 MGST2Q99735 147 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 C20orf144Q9BQM9 153 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 SNAI2O43623 268 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 FOXH1O75593 365 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 C3orf79P0CE67 100 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 RIGQ13278 110 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 TBR1Q16650 682 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 KIR3DL3Q8N743 410 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 ZNF430Q9H8G1 570 aaPredicted RBP7.65□□□□□ -1.18
COL21A1-201ENST00000244728 OSTCQ9NRP0 149 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 EML5Q05BV3 1969 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 SAA2-SAA4A0A096LPE2 208 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 IZUMO1RA6ND01 250 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 DLL1O00548 723 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 IGHV1-46P01743 117 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 GPX1P07203 203 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 SAA2P0DJI9 122 aaPredicted RBP7.65□□□□□ -1.18
COL21A1-201ENST00000244728 LOXL3P58215 753 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 MORN2Q502X0 79 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 FAM90A1Q86YD7 464 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 TMEM186Q96B77 213 aa7.65□□□□□ -1.18
COL21A1-201ENST00000244728 A6NDN8 102 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 C19orf67A6NJJ6 358 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 J3QR89 54 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 CORTO00230 105 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 ZNF207O43670 478 aaKnown RBP7.65□□□□□ -1.19
COL21A1-201ENST00000244728 COA6Q5JTJ3 125 aaKnown RBP7.65□□□□□ -1.19
COL21A1-201ENST00000244728 C10orf55Q5SWW7 151 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 LHFPL4Q7Z7J7 247 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 NEU1Q99519 415 aa7.65□□□□□ -1.19
COL21A1-201ENST00000244728 TRAV9-2A0A087WT02 112 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 FBLL1A6NHQ2 334 aaKnown RBP7.64□□□□□ -1.19
COL21A1-201ENST00000244728 PRR30Q53SZ7 412 aaPredicted RBP7.64□□□□□ -1.19
COL21A1-201ENST00000244728 PYGO2Q9BRQ0 406 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 FBXL7Q9UJT9 491 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 TRAV3A0A0B4J244 114 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 IGHV3-66A0A0C4DH42 116 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 HIGD1CA8MV81 97 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 FAM106CPP0CH98 169 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 HBBP68871 147 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 FBLN7Q53RD9 439 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 OR10J3Q5JRS4 329 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 COLCA1Q6ZS62 124 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 RAB37Q96AX2 223 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 C19orf24Q9BVV8 132 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 SORL1Q92673 2214 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 NPIPB11E5RHQ5 1161 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 HLA-DRB1P01911 266 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 SELENOTP62341 195 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 GRAMD2BQ96HH9 432 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 PLSCR4Q9NRQ2 329 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 CDC42EP3Q9UKI2 254 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 MKI67P46013 3256 aaKnown RBP7.64□□□□□ -1.19
COL21A1-201ENST00000244728 PEX7O00628 323 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 CA7P43166 264 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 NMUP48645 174 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 ZNF474Q6S9Z5 364 aaPredicted RBP7.64□□□□□ -1.19
COL21A1-201ENST00000244728 TMEM144Q7Z5S9 345 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 RNASE6Q93091 150 aaKnown RBP7.64□□□□□ -1.19
COL21A1-201ENST00000244728 PMCHL2Q9BQD1 86 aa7.64□□□□□ -1.19
COL21A1-201ENST00000244728 HIVEP2P31629 2446 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 ZNF503-AS2A6NEH8 195 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 IL4P05112 153 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 NEUROG1Q92886 237 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 MRPL32Q9BYC8 188 aaKnown RBP7.63□□□□□ -1.19
COL21A1-201ENST00000244728 IFI27L2Q9H2X8 130 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 MUC21A0A0G2JKD1 596 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 MUC21A0A140T8X8 626 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 MLNRO43193 412 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 NUPR1O60356 82 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 PRSS1P07477 247 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 MUC21Q5SSG8 566 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 NAV3Q8IVL0 2385 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 C15orf61A6NNL5 157 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 C9JCJ5 164 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 SAA1P0DJI8 122 aaPredicted RBP7.63□□□□□ -1.19
COL21A1-201ENST00000244728 PYYP10082 97 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 LDLRAD2Q5SZI1 272 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 TCF24Q7RTU0 167 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 NIT1Q86X76 327 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 OR10W1Q8NGF6 305 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 DPM3Q9P2X0 92 aa7.63□□□□□ -1.19
COL21A1-201ENST00000244728 MYOD1P15172 320 aa7.62□□□□□ -1.19
COL21A1-201ENST00000244728 CD177Q8N6Q3 437 aa7.62□□□□□ -1.19
COL21A1-201ENST00000244728 YPEL4Q96NS1 127 aa7.62□□□□□ -1.19
COL21A1-201ENST00000244728 SRRM5B3KS81 715 aa7.62□□□□□ -1.19
COL21A1-201ENST00000244728 COMPP49747 757 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms