RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ADORA2A-AS1P86434 159 aa17.62■□□□□ 0.41
RNF39-201ENST00000244360 OR5I1Q13606 314 aa17.62■□□□□ 0.41
RNF39-201ENST00000244360 MRPL52Q86TS9 123 aaKnown RBP17.62■□□□□ 0.41
RNF39-201ENST00000244360 BAGE3Q86Y29 109 aa17.62■□□□□ 0.41
RNF39-201ENST00000244360 BAGE2Q86Y30 109 aa17.62■□□□□ 0.41
RNF39-201ENST00000244360 TBX15Q96SF7 602 aa17.62■□□□□ 0.41
RNF39-201ENST00000244360 SLC25A33Q9BSK2 321 aa17.62■□□□□ 0.41
RNF39-201ENST00000244360 CRYGBP07316 175 aa17.61■□□□□ 0.41
RNF39-201ENST00000244360 THAP8Q8NA92 274 aa17.61■□□□□ 0.41
RNF39-201ENST00000244360 GGTLC3B5MD39 225 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 LINC00310P59036 64 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 NHLH1Q02575 133 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 OR5AU1Q8NGC0 362 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 CLEC7AQ9BXN2 247 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 SPTA1P02549 2419 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 Q6ZWC4 215 aa17.6■□□□□ 0.41
RNF39-201ENST00000244360 IGLC7A0M8Q6 106 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 M0R143 59 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 NUTF2P61970 127 aaKnown RBP17.59■□□□□ 0.41
RNF39-201ENST00000244360 CDSNQ15517 529 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 TEX43Q6ZNM6 134 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 IGKV1D-37A0A075B6S9 117 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 IGHV3-72A0A0B4J1Y9 119 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 BUB1B-PAK6H3BSN5 160 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 ENSAO43768 121 aaKnown RBP17.59■□□□□ 0.41
RNF39-201ENST00000244360 SSBP2P81877 361 aaPredicted RBP17.59■□□□□ 0.41
RNF39-201ENST00000244360 OR10J3Q5JRS4 329 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 TOMM20LQ6UXN7 152 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 FAM167A-AS1Q96KT0 104 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 IGF2BP2-AS1Q96M15 143 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 IGF2RP11717 2491 aa17.59■□□□□ 0.41
RNF39-201ENST00000244360 EREGO14944 169 aa17.58■□□□□ 0.4
RNF39-201ENST00000244360 C20orf144Q9BQM9 153 aa17.58■□□□□ 0.4
RNF39-201ENST00000244360 SAMD10Q9BYL1 202 aa17.58■□□□□ 0.4
RNF39-201ENST00000244360 NAT8BQ9UHF3 227 aa17.58■□□□□ 0.4
RNF39-201ENST00000244360 PPIAL4CA0A0B4J2A2 164 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 IGHV1-3A0A0C4DH29 117 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 TCRBV4S1A1TA0A5B7 111 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 PPIAL4GP0DN37 164 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 SUMO1P63165 101 aaKnown RBP17.57■□□□□ 0.4
RNF39-201ENST00000244360 IBA57Q5T440 356 aaKnown RBP17.57■□□□□ 0.4
RNF39-201ENST00000244360 OR1L4Q8NGR5 311 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 NPIPB3Q92617 1050 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 HSPB9Q9BQS6 159 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 DNAJC4Q9NNZ3 241 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 MALRD1Q5VYJ5 2156 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 HLA-DQA1P01909 254 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 CRYGCP07315 174 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 DLX1P56177 255 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 TPTE2P1Q5T6R2 138 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 SLC25A2Q9BXI2 301 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 RNASE7Q9H1E1 156 aaKnown RBP17.57■□□□□ 0.4
RNF39-201ENST00000244360 CDC42EP3Q9UKI2 254 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 NAV3Q8IVL0 2385 aa17.57■□□□□ 0.4
RNF39-201ENST00000244360 SMIM27A0A1W2PRY6 76 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 AMY1AP04745 511 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 BRS3P32247 399 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 UBE2L3P68036 154 aaKnown RBP17.56■□□□□ 0.4
RNF39-201ENST00000244360 TMEM183BQ1AE95 376 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 TMEM136Q6ZRR5 245 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 LY6G5BQ8NDX9 201 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 CBLN4Q9NTU7 201 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 MRPL36Q9P0J6 103 aaKnown RBP17.56■□□□□ 0.4
RNF39-201ENST00000244360 IGLV2-8P01709 118 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 OR8B3Q8NGG8 313 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 OR8B2Q96RD0 313 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 SNHG12Q9BXW3 62 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 SIGLEC9Q9Y336 463 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 INSIG2Q9Y5U4 225 aa17.56■□□□□ 0.4
RNF39-201ENST00000244360 M0QZK8 103 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 RAB4AP20338 218 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 RPL27AP46776 148 aaKnown RBP17.55■□□□□ 0.4
RNF39-201ENST00000244360 BPIFB3P59826 476 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 MORN5Q5VZ52 161 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 SIGLECL1Q8N7X8 197 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 AMMECR1Q9Y4X0 333 aaPredicted RBP17.55■□□□□ 0.4
RNF39-201ENST00000244360 LY6LH3BQJ8 138 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 CNTFRP26992 372 aa17.55■□□□□ 0.4
RNF39-201ENST00000244360 REG1AP05451 166 aa17.54■□□□□ 0.4
RNF39-201ENST00000244360 COMPP49747 757 aaPredicted RBP17.54■□□□□ 0.4
RNF39-201ENST00000244360 PAX2Q02962 417 aa17.54■□□□□ 0.4
RNF39-201ENST00000244360 ETFRF1Q6IPR1 90 aa17.54■□□□□ 0.4
RNF39-201ENST00000244360 RASL11AQ6T310 242 aa17.54■□□□□ 0.4
RNF39-201ENST00000244360 GNB4Q9HAV0 340 aa17.54■□□□□ 0.4
RNF39-201ENST00000244360 ZNF586Q9NXT0 402 aa17.54■□□□□ 0.4
RNF39-201ENST00000244360 COX7A2P2O60397 106 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 MGST1P10620 155 aaKnown RBP17.53■□□□□ 0.4
RNF39-201ENST00000244360 MFAP2P55001 183 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 PATE2Q6UY27 113 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 RAB1BQ9H0U4 201 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 IZUMO1RA6ND01 250 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 TCAPO15273 167 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 PRB3Q04118 309 aaPredicted RBP17.53■□□□□ 0.4
RNF39-201ENST00000244360 FXYD3Q14802 87 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 TNXAQ16473 311 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 FAM231DQ6ZW35 169 aa17.53■□□□□ 0.4
RNF39-201ENST00000244360 TRAV5A0A0B4J249 113 aa17.52■□□□□ 0.4
RNF39-201ENST00000244360 COX7A1P24310 79 aa17.52■□□□□ 0.4
RNF39-201ENST00000244360 C10orf113Q5VZT2 155 aa17.52■□□□□ 0.4
RNF39-201ENST00000244360 C11orf71Q6IPW1 123 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms