RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 FGF8P55075 233 aaPredicted RBP13.67□□□□□ -0.22
HOXC6-201ENST00000243108 TMEM144Q7Z5S9 345 aa13.67□□□□□ -0.22
HOXC6-201ENST00000243108 PPP1R27Q86WC6 154 aa13.67□□□□□ -0.22
HOXC6-201ENST00000243108 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
HOXC6-201ENST00000243108 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
HOXC6-201ENST00000243108 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
HOXC6-201ENST00000243108 PXMP4Q9Y6I8 212 aa13.67□□□□□ -0.22
HOXC6-201ENST00000243108 DNASE2O00115 360 aaPredicted RBP13.66□□□□□ -0.22
HOXC6-201ENST00000243108 BCL2P10415 239 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 GPX4P36969 197 aaPredicted RBP13.66□□□□□ -0.22
HOXC6-201ENST00000243108 NPBWR1P48145 328 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 DEFA6Q01524 100 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 CD69Q07108 199 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 PVRIGQ6DKI7 326 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 FAM122CQ6P4D5 195 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
HOXC6-201ENST00000243108 WIPF2Q8TF74 440 aaPredicted RBP13.66□□□□□ -0.22
HOXC6-201ENST00000243108 CACNG8Q8WXS5 425 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
HOXC6-201ENST00000243108 METTL1Q9UBP6 276 aaKnown RBP13.66□□□□□ -0.22
HOXC6-201ENST00000243108 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
HOXC6-201ENST00000243108 RPL27AP46776 148 aaKnown RBP13.65□□□□□ -0.22
HOXC6-201ENST00000243108 RPL29P47914 159 aaKnown RBP13.65□□□□□ -0.22
HOXC6-201ENST00000243108 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
HOXC6-201ENST00000243108 RAB31Q13636 194 aa13.65□□□□□ -0.22
HOXC6-201ENST00000243108 MRPL41Q8IXM3 137 aaKnown RBP13.65□□□□□ -0.22
HOXC6-201ENST00000243108 ZNF114Q8NC26 417 aa13.65□□□□□ -0.22
HOXC6-201ENST00000243108 CLRN3Q8NCR9 226 aa13.65□□□□□ -0.22
HOXC6-201ENST00000243108 FAM110DQ8TAY7 271 aaPredicted RBP13.65□□□□□ -0.22
HOXC6-201ENST00000243108 OR13C7P0DN81 318 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 CDC34P49427 236 aaPredicted RBP13.64□□□□□ -0.23
HOXC6-201ENST00000243108 GAMTQ14353 236 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 TNXAQ16473 311 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 TMEM95Q3KNT9 176 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 CCDC144NLQ6NUI1 221 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 RXFP4Q8TDU9 374 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 P2RX4Q99571 388 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 ACTL6BO94805 426 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 IFNA1P01562 189 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 SSBP2P81877 361 aaPredicted RBP13.64□□□□□ -0.23
HOXC6-201ENST00000243108 PRR20EP86478 221 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 PRR20CP86479 221 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 PRR20DP86480 221 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 PRR20BP86481 221 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 PRR20AP86496 221 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 GCSAMLQ5JQS6 135 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 FBXL15Q9H469 300 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
HOXC6-201ENST00000243108 FAM74A7A6NL05 159 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 ZFP92A6NM28 416 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 EIF3GO75821 320 aaKnown RBP eCLIP13.63□□□□□ -0.23
HOXC6-201ENST00000243108 NDUFA3O95167 84 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 MOSP00540 346 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 B2MP61769 119 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 FAM74A3Q4VXF1 159 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 SOHLH1Q5JUK2 328 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 SLC16A13Q7RTY0 426 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 STPG3Q8N7X2 389 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 NPBQ8NG41 125 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 VAX2Q9UIW0 290 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 SLC45A2Q9UMX9 530 aa13.63□□□□□ -0.23
HOXC6-201ENST00000243108 PLXNB1O43157 2135 aa13.62□□□□□ -0.23
HOXC6-201ENST00000243108 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
HOXC6-201ENST00000243108 TEX22C9J3V5 150 aa13.62□□□□□ -0.23
HOXC6-201ENST00000243108 NDUFS6O75380 124 aaKnown RBP13.62□□□□□ -0.23
HOXC6-201ENST00000243108 CD28P10747 220 aa13.62□□□□□ -0.23
HOXC6-201ENST00000243108 TAGLN2P37802 199 aaKnown RBP13.62□□□□□ -0.23
HOXC6-201ENST00000243108 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.62□□□□□ -0.23
HOXC6-201ENST00000243108 WNT10AQ9GZT5 417 aa13.62□□□□□ -0.23
HOXC6-201ENST00000243108 HMGB3O15347 200 aaKnown RBP13.61□□□□□ -0.23
HOXC6-201ENST00000243108 NBR2O15453 112 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 LINC00869P0C866 280 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 DEFA4P12838 97 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 MLANAQ16655 118 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 CYB561D1Q8N8Q1 229 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
HOXC6-201ENST00000243108 SLC35E1Q96K37 410 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 SRSF8Q9BRL6 282 aaKnown RBP13.61□□□□□ -0.23
HOXC6-201ENST00000243108 PRSS22Q9GZN4 317 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 FNDC4Q9H6D8 234 aaPredicted RBP13.61□□□□□ -0.23
HOXC6-201ENST00000243108 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 TMA7Q9Y2S6 64 aaKnown RBP13.61□□□□□ -0.23
HOXC6-201ENST00000243108 AMY1AP04745 511 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 EBI3Q14213 229 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 MMDQ15546 238 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 TMPRSS5Q9H3S3 457 aa13.61□□□□□ -0.23
HOXC6-201ENST00000243108 A0A1W2PPV4 95 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 ADARB2-AS1A8MUL3 147 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 FCN1O00602 326 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 SNRNP70P08621 437 aaKnown RBP13.6□□□□□ -0.23
HOXC6-201ENST00000243108 AREGP15514 252 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 C1QL4Q86Z23 238 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 Q8N6K4 173 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 OR2T10Q8NGZ9 312 aa13.6□□□□□ -0.23
HOXC6-201ENST00000243108 SRSF12Q8WXF0 261 aaKnown RBP13.6□□□□□ -0.23
HOXC6-201ENST00000243108 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
HOXC6-201ENST00000243108 NUPL2O15504 423 aaKnown RBP13.59□□□□□ -0.23
HOXC6-201ENST00000243108 REG1AP05451 166 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms