RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 FFAR4Q5NUL3 377 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 OR1N2Q8NGR9 330 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 BSCL2Q96G97 398 aaPredicted RBP8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 AQP10Q96PS8 301 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 TXN2Q99757 166 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 RNF126Q9BV68 326 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 SLC25A22Q9H936 323 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 TREM1Q9NP99 234 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 PLXNB1O43157 2135 aa8.73□□□□□ -1.01
TNFAIP3-201ENST00000237289 H0YIZ8 118 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 NPPCP23582 126 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 TAS2R45P59539 299 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 TMEM14EPQ6UXP3 125 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 SLC39A9Q9NUM3 307 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 SETXQ7Z333 2677 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 ZNF785A8K8V0 405 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 HYPMO75409 117 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 OR2C1O95371 312 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 IGHG4P01861 327 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 AMY1AP04745 511 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 IL4P05112 153 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 CRYGCP07315 174 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 LINC00869P0C866 280 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 TIGITQ495A1 244 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 OR11H1Q8NG94 326 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 OR51G1Q8NGK1 321 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 PFDN5Q99471 154 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 DNASE2O00115 360 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 OR8I2Q8N0Y5 310 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 TEP1Q99973 2627 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 SLC25A32Q9H2D1 315 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 KLK15Q9H2R5 256 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 RPL7L1Q6DKI1 246 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 KCNRGQ8N5I3 272 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 UBE2E2Q96LR5 201 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 CITED2Q99967 270 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 RABAC1Q9UI14 185 aa8.72□□□□□ -1.01
TNFAIP3-201ENST00000237289 MFSD2BA6NFX1 497 aa8.71□□□□□ -1.01
TNFAIP3-201ENST00000237289 LINC01619G3V211 115 aa8.71□□□□□ -1.01
TNFAIP3-201ENST00000237289 MLANAQ16655 118 aa8.71□□□□□ -1.01
TNFAIP3-201ENST00000237289 FAM122CQ6P4D5 195 aa8.71□□□□□ -1.01
TNFAIP3-201ENST00000237289 BAP18Q8IXM2 172 aa8.71□□□□□ -1.01
TNFAIP3-201ENST00000237289 UFC1Q9Y3C8 167 aa8.71□□□□□ -1.01
TNFAIP3-201ENST00000237289 IGHV3OR16-8A0A075B7F1 116 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 TGOLN2O43493 480 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 PAFAH1B2P68402 229 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 TMEM182Q6ZP80 229 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 RBPMS2Q6ZRY4 209 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 CYP2G1PQ6ZSU1 146 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 HIGD1AQ9Y241 93 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 FBN2P35556 2912 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGKV3-7A0A075B6H7 116 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 TRAV14DV4A0A0A6YYC5 116 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 SOX15O60248 233 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 CD28P10747 220 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 GAMTQ14353 236 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 LAMTOR1Q6IAA8 161 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 C2CD3Q4AC94 2353 aa8.71□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF207O43670 478 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 OR7C2O60412 319 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 HSPB1P04792 205 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 LGALS1P09382 135 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 CD33P20138 364 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 SRSF4Q08170 494 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF345Q14585 488 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 FBLN7Q53RD9 439 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 AWAT1Q58HT5 328 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 C10orf113Q5VZT2 155 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF114Q8NC26 417 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 ACTR3CQ9C0K3 210 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 C16orf95Q9H693 158 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 PXMP4Q9Y6I8 212 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGLV11-55A0A075B6I3 123 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 A0A1B0GV50 99 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 FAM213BQ8TBF2 198 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 RNF2Q99496 336 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 INS-IGF2F8WCM5 200 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 FCGR2BP31994 310 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 PVRIGQ6DKI7 326 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 PPP5D1E7EU14 171 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 AGPAT2O15120 278 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 MIC13Q5XKP0 118 aa8.7□□□□□ -1.02
TNFAIP3-201ENST00000237289 RHOBP62745 196 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 SERTAD4Q9NUC0 356 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF705EA8MWA4 302 aaPredicted RBP8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 CCL24O00175 119 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 TMEM50AO95807 157 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 PAX9P55771 341 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 GUCA2BQ16661 112 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 ALKAL2Q6UX46 152 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 TMED6Q8WW62 240 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 CDX1P47902 265 aaPredicted RBP8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 SYNJ2BPP57105 145 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms