RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 Q9H3A6 140 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 C9JAW5 83 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 IGHV4-34P06331 123 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 PRSS2P07478 247 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 IFI27P40305 119 aaPredicted RBP10.66□□□□□ -0.7
VAMP4-201ENST00000236192 MGPP08493 103 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 NOGQ13253 232 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 MOGAT3Q86VF5 341 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 SHISA5Q8N114 240 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 NPIPB3Q92617 1050 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 JPT1Q9UK76 154 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 WDR81Q562E7 1941 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 LCTP09848 1927 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 F5H697 171 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 MEOX1P50221 254 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 LINC01545Q5VT33 79 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 C1RLQ9NZP8 487 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 IGKV1-27A0A075B6S5 117 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 PYYP10082 97 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 DEFB108BQ8NET1 73 aa10.65□□□□□ -0.7
VAMP4-201ENST00000236192 GCSAMQ8N6F7 178 aa10.65□□□□□ -0.71
VAMP4-201ENST00000236192 SSC4DQ8WTU2 575 aa10.65□□□□□ -0.71
VAMP4-201ENST00000236192 OTORQ9NRC9 128 aa10.65□□□□□ -0.71
VAMP4-201ENST00000236192 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 OR9G1Q8NH87 305 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 XIRP1Q702N8 1843 aaKnown RBP10.64□□□□□ -0.71
VAMP4-201ENST00000236192 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 C12orf77C9JDV5 145 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 NTF4P34130 210 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 HEATR5AQ86XA9 2040 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 CT83Q5H943 113 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 SPTY2D1-AS1A0A0U1RR47 76 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
VAMP4-201ENST00000236192 NPPCP23582 126 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
VAMP4-201ENST00000236192 SPAARA0A1B0GVQ0 90 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 NPIPB5A8MRT5 1133 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 TGFBR3LH3BV60 316 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 Q6ZUT4 128 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 ZNF581Q9P0T4 197 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 TEX45Q8NA69 505 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 ZNF747Q9BV97 191 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 SPANXB1Q9NS25 103 aaPredicted RBP10.63□□□□□ -0.71
VAMP4-201ENST00000236192 IGKV3-11P04433 115 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 FXYD7P58549 80 aa10.63□□□□□ -0.71
VAMP4-201ENST00000236192 TRACP01848 142 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 SRSF1Q07955 248 aaKnown RBP eCLIP10.62□□□□□ -0.71
VAMP4-201ENST00000236192 RNPS1Q15287 305 aaKnown RBP10.62□□□□□ -0.71
VAMP4-201ENST00000236192 MOB3BQ86TA1 216 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 YLPM1P49750 1951 aaKnown RBP10.62□□□□□ -0.71
VAMP4-201ENST00000236192 H3BMM0 161 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 COPS9Q8WXC6 57 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 TRPM7Q96QT4 1865 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 PSG7Q13046 419 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 DOCK11Q5JSL3 2073 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 MTCL1Q9Y4B5 1905 aaKnown RBP10.62□□□□□ -0.71
VAMP4-201ENST00000236192 ZNF497Q6ZNH5 498 aa10.62□□□□□ -0.71
VAMP4-201ENST00000236192 TRBV6-6A0A0A6YYG2 114 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 GREB1Q4ZG55 1949 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 TRAV24A0A0B4J272 114 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 FOXI3A8MTJ6 420 aaPredicted RBP10.61□□□□□ -0.71
VAMP4-201ENST00000236192 FAM110AQ9BQ89 295 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 DLX6P56179 175 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 MPDZO75970 2070 aa10.61□□□□□ -0.71
VAMP4-201ENST00000236192 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 PRDX2P32119 198 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 ZNF329Q86UD4 541 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 ZNF492Q9P255 531 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-201ENST00000236192 IGHV3-21A0A0B4J1V1 117 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 TRGV8A0A0C4DH27 118 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 MGST3O14880 152 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 MT-ATP8P03928 68 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 C11orf1Q9H5F2 150 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 LIFP15018 202 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
VAMP4-201ENST00000236192 A0A0J9YW62 118 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 CD24P25063 80 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 TMEM196Q5HYL7 178 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
VAMP4-201ENST00000236192 LOXL3P58215 753 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 LILRA6Q6PI73 481 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 TMEM190Q8WZ59 177 aa10.59□□□□□ -0.71
VAMP4-201ENST00000236192 HAX1O00165 279 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms