RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 IAH1Q2TAA2 248 aaPredicted RBP9.53□□□□□ -0.88
LSM5-201ENST00000223084 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 ENKURQ8TC29 256 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 ZNF431Q8TF32 576 aaPredicted RBP9.53□□□□□ -0.88
LSM5-201ENST00000223084 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 ACY3Q96HD9 319 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 TRAV14DV4A0A0A6YYC5 116 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 IGHV7-4-1A0A0J9YVY3 117 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 H3BP45 60 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 CHEK1O14757 476 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 SCGB1D2O95969 90 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 APOHP02749 345 aaPredicted RBP9.52□□□□□ -0.89
LSM5-201ENST00000223084 IGLC1P0CG04 106 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 OR10J1P30954 320 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
LSM5-201ENST00000223084 SPANXN5Q5MJ07 72 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 ETFRF1Q6IPR1 90 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
LSM5-201ENST00000223084 NRARPQ7Z6K4 114 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 ZBTB8BQ8NAP8 495 aaPredicted RBP9.52□□□□□ -0.89
LSM5-201ENST00000223084 TMEM116Q8NCL8 245 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 CIB3Q96Q77 187 aaPredicted RBP9.52□□□□□ -0.89
LSM5-201ENST00000223084 NEURL2Q9BR09 285 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 RHPN1-AS1Q9BWJ2 59 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 WFDC10AQ9H1F0 79 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 GSKIPQ9P0R6 139 aa9.52□□□□□ -0.89
LSM5-201ENST00000223084 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 FAM25EA8MYX2 175 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 SSSCA1O60232 199 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
LSM5-201ENST00000223084 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 C12orf45Q8N5I9 185 aaPredicted RBP9.51□□□□□ -0.89
LSM5-201ENST00000223084 DEFB125Q8N687 156 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 OR1S2Q8NGQ3 325 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 RNF2Q99496 336 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 C19orf73Q9NVV2 129 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 COL7A1Q02388 2944 aa9.51□□□□□ -0.89
LSM5-201ENST00000223084 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 GPX4P36969 197 aaPredicted RBP9.5□□□□□ -0.89
LSM5-201ENST00000223084 RAB11AP62491 216 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 RPP30P78346 268 aaKnown RBP9.5□□□□□ -0.89
LSM5-201ENST00000223084 GAMTQ14353 236 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 LILRB2Q8N423 598 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 ST8SIA2Q92186 375 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 GINS3Q9BRX5 216 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 PSENENQ9NZ42 101 aa9.5□□□□□ -0.89
LSM5-201ENST00000223084 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 TSPAN4O14817 238 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 MBPP02686 304 aaPredicted RBP9.49□□□□□ -0.89
LSM5-201ENST00000223084 IL5P05113 134 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 PAX9P55771 341 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 YPEL3P61236 119 aaPredicted RBP9.49□□□□□ -0.89
LSM5-201ENST00000223084 LAMTOR1Q6IAA8 161 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 SLC35E1Q96K37 410 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 TUBA4BQ9H853 241 aa9.49□□□□□ -0.89
LSM5-201ENST00000223084 STRAPQ9Y3F4 350 aaKnown RBP9.49□□□□□ -0.89
LSM5-201ENST00000223084 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 A8MZ25 164 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 OR11H12B2RN74 326 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 PRSS46E5RG02 174 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 INMT-MINDY4F8WBC2 141 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 CCNKO75909 580 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 NPPCP23582 126 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 TFPI2P48307 235 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 DEFA1P59665 94 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 DEFA3P59666 94 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 GBGT1Q8N5D6 347 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 Q8WTZ3 238 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 SMIM8Q96KF7 97 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 METTL26Q96S19 204 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 SPAG8Q99932 426 aaPredicted RBP9.48□□□□□ -0.89
LSM5-201ENST00000223084 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 SRD5A3Q9H8P0 318 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 UBQLN2Q9UHD9 624 aa9.48□□□□□ -0.89
LSM5-201ENST00000223084 RCL1Q9Y2P8 373 aaKnown RBP9.48□□□□□ -0.89
LSM5-201ENST00000223084 ZFP92A6NM28 416 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 DFFBO76075 338 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 TOMM40O96008 361 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 IL4P05112 153 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 NHLRC4P0CG21 123 aaPredicted RBP9.47□□□□□ -0.89
LSM5-201ENST00000223084 RD3LP0DJH9 198 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 PSG1P11464 419 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 CRYBB3P26998 211 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 ZNF90Q03938 601 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 USF2Q15853 346 aaPredicted RBP9.47□□□□□ -0.89
LSM5-201ENST00000223084 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 OR8G2PQ6IF36 304 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 TCF24Q7RTU0 167 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
LSM5-201ENST00000223084 LSM5Q9Y4Y9 91 aaKnown RBP9.47□□□□□ -0.89
LSM5-201ENST00000223084 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
LSM5-201ENST00000223084 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
LSM5-201ENST00000223084 RBMY1BA6NDE4 496 aaKnown RBP9.46□□□□□ -0.9
LSM5-201ENST00000223084 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.9
LSM5-201ENST00000223084 PMS2P5A8MQ11 134 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms