RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 TMEM41BQ5BJD5 291 aa11.83□□□□□ -0.52
STX1A-201ENST00000222812 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.52
STX1A-201ENST00000222812 FAM90A2PQ658T7 463 aa11.83□□□□□ -0.52
STX1A-201ENST00000222812 PITPNC1Q9UKF7 332 aa11.83□□□□□ -0.52
STX1A-201ENST00000222812 TIMM9Q9Y5J7 89 aa11.83□□□□□ -0.52
STX1A-201ENST00000222812 NF1P21359 2839 aa11.83□□□□□ -0.52
STX1A-201ENST00000222812 NSD1Q96L73 2696 aaPredicted RBP11.82□□□□□ -0.52
STX1A-201ENST00000222812 PRSS46E5RG02 174 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 SLC38A11Q08AI6 406 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 MLANAQ16655 118 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 SLC16A13Q7RTY0 426 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 CENPVQ7Z7K6 275 aaPredicted RBP11.82□□□□□ -0.52
STX1A-201ENST00000222812 Q8WTZ3 238 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 RCC1LQ96I51 464 aaKnown RBP11.82□□□□□ -0.52
STX1A-201ENST00000222812 TMPRSS5Q9H3S3 457 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 ATP6V0E1O15342 81 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 KIAA0141Q14154 515 aaPredicted RBP11.82□□□□□ -0.52
STX1A-201ENST00000222812 TEX29Q8N6K0 151 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 DMRT1Q9Y5R6 373 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 F8P00451 2351 aa11.82□□□□□ -0.52
STX1A-201ENST00000222812 LY86O95711 162 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 IFNA1P01562 189 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 HOXA5P20719 270 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 RAB11AP62491 216 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 RPP30P78346 268 aaKnown RBP11.81□□□□□ -0.52
STX1A-201ENST00000222812 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 C2orf83Q53S99 150 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 OR10P1Q8NGE3 313 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.52
STX1A-201ENST00000222812 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
STX1A-201ENST00000222812 ZFP92A6NM28 416 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 CLN5O75503 358 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 CXCL1P09341 107 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 HNF1AP20823 631 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 LCN15Q6UWW0 184 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 OR5R1Q8NH85 324 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 NIT2Q9NQR4 276 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 G3V318 75 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 IGHV3-48P01763 117 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 RND2P52198 227 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 OR5T1Q8NG75 326 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 WNT10AQ9GZT5 417 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 OR51M1Q9H341 326 aa11.8□□□□□ -0.52
STX1A-201ENST00000222812 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 TGOLN2O43493 480 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 NDUFS6O75380 124 aaKnown RBP11.79□□□□□ -0.52
STX1A-201ENST00000222812 FABP1P07148 127 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
STX1A-201ENST00000222812 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 SGMS2Q8NHU3 365 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 GSN-AS1Q9NRJ2 163 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 TMEM160Q9NX00 188 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 IGHV3-21A0A0B4J1V1 117 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 CLDN34H7C241 214 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 S100PP25815 95 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 ARSJQ5FYB0 599 aaPredicted RBP11.79□□□□□ -0.52
STX1A-201ENST00000222812 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 C16orf82Q7Z2V1 217 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
STX1A-201ENST00000222812 F11RQ9Y624 299 aaKnown RBP11.79□□□□□ -0.52
STX1A-201ENST00000222812 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
STX1A-201ENST00000222812 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 INAFM1C9JVW0 142 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 UNQ5815/PRO19632Q6UWF5 114 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 CTDSP1Q9GZU7 261 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
STX1A-201ENST00000222812 ESM1Q9NQ30 184 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 SLC39A9Q9NUM3 307 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 URGCP-MRPS24S4R325 110 aa11.78□□□□□ -0.52
STX1A-201ENST00000222812 TGIF2-C20orf24A0A0A6YYL0 155 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 M0QZK8 103 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 IGHG2P01859 326 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 MBP02144 154 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 FOSL1P15407 271 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.52
STX1A-201ENST00000222812 TMEM95Q3KNT9 176 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 OR1P1Q8NH06 330 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.52
STX1A-201ENST00000222812 SRSF8Q9BRL6 282 aaKnown RBP11.77□□□□□ -0.52
STX1A-201ENST00000222812 TMEM147Q9BVK8 224 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.52
STX1A-201ENST00000222812 DOK5Q9P104 306 aa11.77□□□□□ -0.52
STX1A-201ENST00000222812 SMCO3A2RU48 225 aa11.77□□□□□ -0.53
STX1A-201ENST00000222812 CYB5BO43169 146 aa11.77□□□□□ -0.53
STX1A-201ENST00000222812 CRYGCP07315 174 aa11.77□□□□□ -0.53
STX1A-201ENST00000222812 DEFA4P12838 97 aa11.77□□□□□ -0.53
STX1A-201ENST00000222812 SRD5A1P18405 259 aa11.77□□□□□ -0.53
STX1A-201ENST00000222812 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.53
STX1A-201ENST00000222812 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
STX1A-201ENST00000222812 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms