RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SMG1Q96Q15 3661 aaKnown RBP17.85■□□□□ 0.45
CCDC9-201ENST00000221922 CGB1A6NKQ9 187 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 ZNF705FA8MVS1 300 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-201ENST00000221922 E7EUB6 86 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 SLC25A17O43808 307 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 ZNF705DP0CH99 300 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-201ENST00000221922 ZNF705BP0CI00 300 aaPredicted RBP17.84■□□□□ 0.45
CCDC9-201ENST00000221922 WT1-ASQ06250 92 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 TPTE2P1Q5T6R2 138 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 DNAJC4Q9NNZ3 241 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 LYNX1G3V0Z9 82 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 RBP4P02753 201 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 LYNX1P0DP58 116 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 TEX43Q6ZNM6 134 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 TMEM136Q6ZRR5 245 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 TEX45Q8NA69 505 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 OR2T6Q8NHC8 308 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 HSPB9Q9BQS6 159 aa17.84■□□□□ 0.45
CCDC9-201ENST00000221922 IGHV2-26A0A0B4J1V2 119 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 SMIM27A0A1W2PRY6 76 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 F2Z2F3 143 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 ENSAO43768 121 aaKnown RBP17.83■□□□□ 0.45
CCDC9-201ENST00000221922 MORN5Q5VZ52 161 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 ZNF841Q6ZN19 808 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 SNHG12Q9BXW3 62 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 PRORYQ9H606 182 aa17.83■□□□□ 0.45
CCDC9-201ENST00000221922 CD33P20138 364 aa17.83■□□□□ 0.44
CCDC9-201ENST00000221922 C10orf55Q5SWW7 151 aa17.83■□□□□ 0.44
CCDC9-201ENST00000221922 OR5AU1Q8NGC0 362 aa17.83■□□□□ 0.44
CCDC9-201ENST00000221922 IGLV1-47P01700 117 aa17.82■□□□□ 0.44
CCDC9-201ENST00000221922 NUTF2P61970 127 aaKnown RBP17.82■□□□□ 0.44
CCDC9-201ENST00000221922 FXYD3Q14802 87 aa17.82■□□□□ 0.44
CCDC9-201ENST00000221922 IBA57Q5T440 356 aaKnown RBP17.82■□□□□ 0.44
CCDC9-201ENST00000221922 GNB4Q9HAV0 340 aa17.82■□□□□ 0.44
CCDC9-201ENST00000221922 CBLN4Q9NTU7 201 aa17.82■□□□□ 0.44
CCDC9-201ENST00000221922 NAT8BQ9UHF3 227 aa17.82■□□□□ 0.44
CCDC9-201ENST00000221922 CDC42EP3Q9UKI2 254 aa17.82■□□□□ 0.44
CCDC9-201ENST00000221922 TRAV5A0A0B4J249 113 aa17.81■□□□□ 0.44
CCDC9-201ENST00000221922 OR10J3Q5JRS4 329 aa17.81■□□□□ 0.44
CCDC9-201ENST00000221922 TOMM20LQ6UXN7 152 aa17.81■□□□□ 0.44
CCDC9-201ENST00000221922 C20orf144Q9BQM9 153 aa17.81■□□□□ 0.44
CCDC9-201ENST00000221922 CLEC7AQ9BXN2 247 aa17.81■□□□□ 0.44
CCDC9-201ENST00000221922 UBE2L3P68036 154 aaKnown RBP17.81■□□□□ 0.44
CCDC9-201ENST00000221922 ATRXP46100 2492 aa17.81■□□□□ 0.44
CCDC9-201ENST00000221922 A0A1W2PPI3 338 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 RAB4AP20338 218 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 ETFRF1Q6IPR1 90 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 THAP8Q8NA92 274 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 OR1L4Q8NGR5 311 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 C8orf46Q8TAG6 207 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 RAB1BQ9H0U4 201 aa17.8■□□□□ 0.44
CCDC9-201ENST00000221922 FNDC4Q9H6D8 234 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-201ENST00000221922 AMMECR1Q9Y4X0 333 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-201ENST00000221922 M0R143 59 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 AMY1AP04745 511 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 SSBP2P81877 361 aaPredicted RBP17.79■□□□□ 0.44
CCDC9-201ENST00000221922 SAMD10Q9BYL1 202 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 TPSG1Q9NRR2 321 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 INSIG2Q9Y5U4 225 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 ZZEF1O43149 2961 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 PPIAL4CA0A0B4J2A2 164 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 TCRBV4S1A1TA0A5B7 111 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 SPINK4O60575 86 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 GPX1P07203 203 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 PPIAL4GP0DN37 164 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 MGST1P10620 155 aaKnown RBP17.79■□□□□ 0.44
CCDC9-201ENST00000221922 BRS3P32247 399 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 CDKN1AP38936 164 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 OR8B3Q8NGG8 313 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 RITA1Q96K30 269 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 OR8B2Q96RD0 313 aa17.79■□□□□ 0.44
CCDC9-201ENST00000221922 IGHV3-72A0A0B4J1Y9 119 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 BUB1B-PAK6H3BSN5 160 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 HLA-DQA1P01909 254 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 BPIFB3P59826 476 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 LY6DQ14210 128 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 MRGPRG-AS1Q2M3A8 158 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 C10orf113Q5VZT2 155 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 PATE2Q6UY27 113 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 IGKV1D-37A0A075B6S9 117 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 IGHV1-3A0A0C4DH29 117 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 COX7A2P2O60397 106 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 RPL27AP46776 148 aaKnown RBP17.78■□□□□ 0.44
CCDC9-201ENST00000221922 COMPP49747 757 aaPredicted RBP17.78■□□□□ 0.44
CCDC9-201ENST00000221922 TCL1AP56279 114 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 TDRG1Q3Y452 100 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 C11orf71Q6IPW1 123 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 SIGLECL1Q8N7X8 197 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 NPIPB3Q92617 1050 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 NEU1Q99519 415 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 ZNF355PQ9NSJ1 428 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 MALRD1Q5VYJ5 2156 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 NCOR2Q9Y618 2525 aa17.78■□□□□ 0.44
CCDC9-201ENST00000221922 IZUMO1RA6ND01 250 aa17.77■□□□□ 0.44
CCDC9-201ENST00000221922 CRYGBP07316 175 aa17.77■□□□□ 0.44
CCDC9-201ENST00000221922 PVRIGQ6DKI7 326 aa17.77■□□□□ 0.44
CCDC9-201ENST00000221922 MRPL52Q86TS9 123 aaKnown RBP17.77■□□□□ 0.44
CCDC9-201ENST00000221922 PAXXQ9BUH6 204 aa17.77■□□□□ 0.44
CCDC9-201ENST00000221922 NAV3Q8IVL0 2385 aa17.77■□□□□ 0.44
CCDC9-201ENST00000221922 IGLC7A0M8Q6 106 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms