RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 CD3DP04234 171 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 HNRNPCP07910 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
NME3-201ENST00000219302 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
NME3-201ENST00000219302 SPCS3P61009 180 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 DHODHQ02127 395 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
NME3-201ENST00000219302 OR1S2Q8NGQ3 325 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 Q8WTZ3 238 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 XCL2Q9UBD3 114 aa11.29□□□□□ -0.6
NME3-201ENST00000219302 RPS10-NUDT3A0A1W2PQS6 291 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 HTR2BP41595 481 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 NCS1P62166 190 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
NME3-201ENST00000219302 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
NME3-201ENST00000219302 TERB2Q8NHR7 220 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 RRNAD1Q96FB5 475 aaKnown RBP11.28□□□□□ -0.6
NME3-201ENST00000219302 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
NME3-201ENST00000219302 M0R2N4 97 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 BUB3O43684 328 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 NXPH3O95157 252 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 CDS2O95674 445 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 SLC25A4P12235 298 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 NPY1RP25929 384 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 OR10J1P30954 320 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 RND2P52198 227 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
NME3-201ENST00000219302 OR4D10Q8NGI6 311 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 OR52I2Q8NH67 350 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 ZFAND1Q8TCF1 268 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 NEU1Q99519 415 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.61
NME3-201ENST00000219302 COPZ2Q9P299 210 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 MTFP1Q9UDX5 166 aa11.27□□□□□ -0.61
NME3-201ENST00000219302 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
NME3-201ENST00000219302 B3GALNT1O75752 331 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 CD74P04233 296 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
NME3-201ENST00000219302 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
NME3-201ENST00000219302 TBPP20226 339 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 VBP1P61758 197 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
NME3-201ENST00000219302 RNASE12Q5GAN4 147 aaKnown RBP11.26□□□□□ -0.61
NME3-201ENST00000219302 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 LHFPL5Q8TAF8 219 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
NME3-201ENST00000219302 GLYATL2Q8WU03 294 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 FUNDC2Q9BWH2 189 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
NME3-201ENST00000219302 A0A087WXM4 84 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 IL4P05112 153 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 NPIPB3Q92617 1050 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 GPR146Q96CH1 333 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 ABHD1Q96SE0 405 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 RTBDNQ9BSG5 229 aaPredicted RBP11.25□□□□□ -0.61
NME3-201ENST00000219302 TMEM222Q9H0R3 208 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 HEYLQ9NQ87 328 aaPredicted RBP11.25□□□□□ -0.61
NME3-201ENST00000219302 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
NME3-201ENST00000219302 TEX13DA0A0J9YY54 714 aaPredicted RBP11.24□□□□□ -0.61
NME3-201ENST00000219302 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 OR5AC1P0C628 307 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 SPART-AS1P0CW21 52 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 NKX2-1P43699 371 aaPredicted RBP11.24□□□□□ -0.61
NME3-201ENST00000219302 RORCP51449 518 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 Q6ZR54 194 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
NME3-201ENST00000219302 TMEM229BQ8NBD8 167 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
NME3-201ENST00000219302 RNASE11Q8TAA1 199 aaKnown RBP11.24□□□□□ -0.61
NME3-201ENST00000219302 FAM25AB3EWG3 89 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 FAM25CB3EWG5 89 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 FAM25GB3EWG6 89 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 TOMM40O96008 361 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 RD3LP0DJH9 198 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 DEFB1P60022 68 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 RBPMSQ93062 196 aaKnown RBP11.23□□□□□ -0.61
NME3-201ENST00000219302 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 VCX3AQ9NNX9 186 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 CACNG5Q9UF02 275 aa11.23□□□□□ -0.61
NME3-201ENST00000219302 TMEM189A5PLL7 270 aa11.22□□□□□ -0.61
NME3-201ENST00000219302 RAB3DO95716 219 aa11.22□□□□□ -0.61
NME3-201ENST00000219302 PSG1P11464 419 aa11.22□□□□□ -0.61
NME3-201ENST00000219302 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
NME3-201ENST00000219302 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
NME3-201ENST00000219302 CEBPZOSA8MTT3 80 aa11.21□□□□□ -0.61
NME3-201ENST00000219302 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
NME3-201ENST00000219302 IFNA10P01566 189 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms