RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 LOXL3P58215 753 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 PRCDQ00LT1 54 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 CT45A1Q5HYN5 189 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 FAM231DQ6ZW35 169 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 SPATA12Q7Z6I5 190 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 CT45A3Q8NHU0 189 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 DDB2Q92466 427 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 RAB9BQ9NP90 201 aa7.89□□□□□ -1.15
TUBB1-201ENST00000217133 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 OR2J3O76001 311 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 PLAUP00749 431 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 APOA2P02652 100 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 CD46P15529 392 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 GNG5P63218 68 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 HBBP68871 147 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 FOXC1Q12948 553 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 MORN5Q5VZ52 161 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 C10orf113Q5VZT2 155 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 C1orf229Q6ZS94 237 aaPredicted RBP7.88□□□□□ -1.15
TUBB1-201ENST00000217133 SSX8Q7RTT4 187 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 K7ERU9 68 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 F2RL2O00254 374 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 CHEK1O14757 476 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 CD24P25063 80 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 S100A7P31151 101 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 UTF1Q5T230 341 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 RBMXL3Q8N7X1 1067 aaKnown RBP7.88□□□□□ -1.15
TUBB1-201ENST00000217133 BLNKQ8WV28 456 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
TUBB1-201ENST00000217133 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 C21orf140B9A014 251 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 UPK2O00526 184 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 BPIFB3P59826 476 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 ERHP84090 104 aaKnown RBP7.88□□□□□ -1.15
TUBB1-201ENST00000217133 CD69Q07108 199 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 ATP5L2Q7Z4Y8 100 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 MBD6Q96DN6 1003 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 SLC25A2Q9BXI2 301 aa7.88□□□□□ -1.15
TUBB1-201ENST00000217133 RP1L1Q8IWN7 2480 aaPredicted RBP7.88□□□□□ -1.15
TUBB1-201ENST00000217133 PPBPP02775 128 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF841Q6ZN19 808 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 OR10W1Q8NGF6 305 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 OR1L4Q8NGR5 311 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 PGLYRP4Q96LB8 373 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 AP1S3Q96PC3 154 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 MCRIP2Q9BUT9 160 aaKnown RBP7.87□□□□□ -1.15
TUBB1-201ENST00000217133 SPRR3Q9UBC9 169 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 ICE1Q9Y2F5 2266 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 A8MWL6 223 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 IGHV3-48P01763 117 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 RHOGP84095 191 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 C2orf83Q53S99 150 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 PDPNQ86YL7 162 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 FAM167A-AS1Q96KT0 104 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF257Q9Y2Q1 563 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 TEX50A0A1B0GTY4 177 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 SRRM5B3KS81 715 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 P01737 135 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 CSN3P07498 182 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 CECR9P0C854 216 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF329Q86UD4 541 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 MOGAT3Q86VF5 341 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 DEFB125Q8N687 156 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.87□□□□□ -1.15
TUBB1-201ENST00000217133 PMCHL2Q9BQD1 86 aa7.87□□□□□ -1.15
TUBB1-201ENST00000217133 A0A087X0K7 114 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 IGHV1-24A0A0C4DH33 117 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 RNASE2P10153 161 aaKnown RBP7.86□□□□□ -1.15
TUBB1-201ENST00000217133 GCSAMQ8N6F7 178 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 DEFB108BQ8NET1 73 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 RND1Q92730 232 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 CHCHD1Q96BP2 118 aaKnown RBP7.86□□□□□ -1.15
TUBB1-201ENST00000217133 PGPA6NDG6 321 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 IGKV1-16P04430 117 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 LIPFP07098 398 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 ATP5IP56385 69 aaPredicted RBP7.86□□□□□ -1.15
TUBB1-201ENST00000217133 PSG9Q00887 426 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 Q6ZT83 130 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 ZPBPQ9BS86 351 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 RPP21Q9H633 154 aaKnown RBP7.86□□□□□ -1.15
TUBB1-201ENST00000217133 GAGE12BA1L429 117 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 TMEM177Q53S58 311 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 FAM201AQ5SY85 155 aa7.86□□□□□ -1.15
TUBB1-201ENST00000217133 PEF1Q9UBV8 284 aaKnown RBP7.86□□□□□ -1.15
TUBB1-201ENST00000217133 MED13Q9UHV7 2174 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 KBTBD11-OT1A0A1B0GTJ5 212 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 SNAI2O43623 268 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 HLA-DRB1P01911 266 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 ORM2P19652 201 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF138P52744 262 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 RPS20P60866 119 aaKnown RBP7.85□□□□□ -1.15
TUBB1-201ENST00000217133 OR1L8Q8NGR8 309 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 CACNG8Q8WXS5 425 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 CADP27708 2225 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 HEATR1Q9H583 2144 aaKnown RBP7.85□□□□□ -1.15
TUBB1-201ENST00000217133 SPTA1P02549 2419 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms