RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 NBR2O15453 112 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 CNIH1O95406 144 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 CA2P00918 260 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 IGHV1-69P01742 117 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 TMEM11P17152 192 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 BRS3P32247 399 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 RPL27AP46776 148 aaKnown RBP7.09□□□□□ -1.27
PHGDH-219ENST00000641513 CTAG1AP78358 180 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 FABP9Q0Z7S8 132 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 PRSS8Q16651 343 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 FFAR4Q5NUL3 377 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 SSX7Q7RTT5 188 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 MRPL41Q8IXM3 137 aaKnown RBP7.09□□□□□ -1.27
PHGDH-219ENST00000641513 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 LRRC75A-AS1Q8N1F1 130 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 LINC01356Q8N9X3 169 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 C2CD4CQ8TF44 421 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 ABHD5Q8WTS1 349 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 Q8WTZ3 238 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 ANAPC16Q96DE5 110 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
PHGDH-219ENST00000641513 RNF5Q99942 180 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 NDUFA4L2Q9NRX3 87 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 HIF1ANQ9NWT6 349 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 SIGLEC9Q9Y336 463 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 INS-IGF2F8WCM5 200 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 REG1AP05451 166 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 CRYGBP07316 175 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 FAM106CPP0CH98 169 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 APELAP0DMC3 54 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 CDX1P47902 265 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-219ENST00000641513 CDC34P49427 236 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-219ENST00000641513 SUB1P53999 127 aaKnown RBP eCLIP7.08□□□□□ -1.28
PHGDH-219ENST00000641513 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-219ENST00000641513 KIAA0141Q14154 515 aaPredicted RBP7.08□□□□□ -1.28
PHGDH-219ENST00000641513 TMEM241Q24JQ0 296 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 BRD3OSQ6XYD6 125 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 PPP1R27Q86WC6 154 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 RAB24Q969Q5 203 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 Q96MF0 132 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 IMMP2LQ96T52 175 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 SMIM7Q9BQ49 75 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 DOK5Q9P104 306 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 LSM4Q9Y4Z0 139 aaKnown RBP7.08□□□□□ -1.28
PHGDH-219ENST00000641513 SPG11Q96JI7 2443 aa7.08□□□□□ -1.28
PHGDH-219ENST00000641513 TACC2O95359 2948 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 E7EUB6 86 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 PPP1R2P9O14990 202 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 TGFAP01135 160 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 TYMSP04818 313 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 FBP1P09467 338 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 SRP14P37108 136 aaKnown RBP7.07□□□□□ -1.28
PHGDH-219ENST00000641513 RPS10P46783 165 aaKnown RBP7.07□□□□□ -1.28
PHGDH-219ENST00000641513 LOXL1Q08397 574 aaPredicted RBP7.07□□□□□ -1.28
PHGDH-219ENST00000641513 BSXQ3C1V8 233 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 FAM120AOSQ5T036 256 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 NANPQ8TBE9 248 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 FAM210BQ96KR6 192 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 C19orf24Q9BVV8 132 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 SRD5A3Q9H8P0 318 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 SLC25A22Q9H936 323 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 LY96Q9Y6Y9 160 aa7.07□□□□□ -1.28
PHGDH-219ENST00000641513 TRAV9-1A0A075B6T8 112 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 FCN1O00602 326 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 PHOX2AO14813 284 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 CXorf1O96002 111 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 PFN1P07737 140 aaKnown RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 CXCL1P09341 107 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 STAG3L2P0CL84 134 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 STAG3L3P0CL85 134 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 IGHV4-38-2P0DP08 117 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 RNASE2P10153 161 aaKnown RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 GATA3P23771 443 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 S100PP25815 95 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 RPL29P47914 159 aaKnown RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 COMPP49747 757 aaPredicted RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 FGF8P55075 233 aaPredicted RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 B2MP61769 119 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 RAB31Q13636 194 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 MRGPRG-AS1Q2M3A8 158 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 C2orf83Q53S99 150 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 COA6Q5JTJ3 125 aaKnown RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 TREML4Q6UXN2 200 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 TMEM170AQ8WVE7 144 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 SSMEM1Q8WWF3 244 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 SRSF12Q8WXF0 261 aaKnown RBP7.06□□□□□ -1.28
PHGDH-219ENST00000641513 MBD6Q96DN6 1003 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 GGTLC1Q9BX51 225 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 NPVFQ9HCQ7 196 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 C1RLQ9NZP8 487 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 NAV3Q8IVL0 2385 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 LRRK2Q5S007 2527 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.283e-11■□□□□ 8.5
PHGDH-219ENST00000641513 PTPN13Q12923 2485 aa7.06□□□□□ -1.28
PHGDH-219ENST00000641513 A0A0U1RQK1 487 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 A0A1W2PPV4 95 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 CGB1A6NKQ9 187 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 H7BYZ3 331 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 GGCTO75223 188 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms