RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
PHGDH-213ENST00000641272 ZNF688P0C7X2 276 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 C4BPBP20851 252 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 LGALS9CQ6DKI2 356 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 FAAP20Q6NZ36 180 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 STHQ8IWL8 128 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 OR13C8Q8NGS7 320 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 ZNF486Q96H40 463 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-213ENST00000641272 MFFQ9GZY8 342 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 ENY2Q9NPA8 101 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 COPZ2Q9P299 210 aa12.19□□□□□ -0.46
PHGDH-213ENST00000641272 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 IFNA4P05014 189 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 P2RY1P47900 373 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 PRR20EP86478 221 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 PRR20CP86479 221 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 PRR20DP86480 221 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 PRR20BP86481 221 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 PRR20AP86496 221 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 MLANAQ16655 118 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 TIGITQ495A1 244 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 ARRDC1Q8N5I2 433 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 DNAH6Q9C0G6 4158 aa12.18□□□□□ -0.46
PHGDH-213ENST00000641272 CORTO00230 105 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 CLN5O75503 358 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 NXPH3O95157 252 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 NPPCP23582 126 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 RORCP51449 518 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHGDH-213ENST00000641272 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 CCDC71LQ8N9Z2 235 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 Q8NAQ8 132 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 METTL26Q96S19 204 aa12.17□□□□□ -0.46
PHGDH-213ENST00000641272 TRAV2A0A0B4J234 112 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 INS-IGF2F8WCM5 200 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 K7EQG2 157 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 ATG12O94817 140 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 CD5P06127 495 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 OR5AC1P0C628 307 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 UCP1P25874 307 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 Q6ZRM9 215 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
PHGDH-213ENST00000641272 LHFPL5Q8TAF8 219 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
PHGDH-213ENST00000641272 ABHD1Q96SE0 405 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 CLEC5AQ9NY25 188 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
PHGDH-213ENST00000641272 RAB3DO95716 219 aa12.15□□□□□ -0.46
PHGDH-213ENST00000641272 IGKV1-17P01599 117 aa12.15□□□□□ -0.46
PHGDH-213ENST00000641272 GIG44P09565 113 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-213ENST00000641272 PVRIGQ6DKI7 326 aa12.15□□□□□ -0.46
PHGDH-213ENST00000641272 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
PHGDH-213ENST00000641272 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
PHGDH-213ENST00000641272 A0A1W2PS18 150 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 IGLL5B9A064 214 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 GABARAPO95166 117 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
PHGDH-213ENST00000641272 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 RND2P52198 227 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
PHGDH-213ENST00000641272 ACTL10Q5JWF8 245 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 ZFAND1Q8TCF1 268 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 AP3S1Q92572 193 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 NARS2Q96I59 477 aaKnown RBP12.14□□□□□ -0.47
PHGDH-213ENST00000641272 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
PHGDH-213ENST00000641272 HERC2O95714 4834 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 SCGB2A1O75556 95 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 SMIM18P0DKX4 95 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 TBPP20226 339 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 CRYBB3P26998 211 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 TAS2R19P59542 299 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 DHRS2Q13268 280 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 MEF2DQ14814 521 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 PSMG4Q5JS54 123 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 STEAP1BQ6NZ63 245 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 Q6ZTC4 211 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 DCANP1Q8TF63 244 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 MIXL1Q9H2W2 232 aa12.13□□□□□ -0.47
PHGDH-213ENST00000641272 HECTD4Q9Y4D8 3996 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 CD74P04233 296 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-213ENST00000641272 HLA-DMBP28068 263 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 SPCS3P61009 180 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 CTF1Q16619 201 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 GPR107Q5VW38 600 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 TMEM229BQ8NBD8 167 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 GRAMD2BQ96HH9 432 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 KRTAP17-1Q9BYP8 105 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 NAA60Q9H7X0 242 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 HEYLQ9NQ87 328 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-213ENST00000641272 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
PHGDH-213ENST00000641272 C14orf166Q9Y224 244 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms