RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 NIT2Q9NQR4 276 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 TCRBV4S1A1TA0A5B7 111 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 C9JCJ5 164 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 OR10J4P0C629 311 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 MORN5Q5VZ52 161 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 LY6G5BQ8NDX9 201 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 RNF2Q99496 336 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 GPR61Q9BZJ8 451 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 CHODLQ9H9P2 273 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 SIGLEC9Q9Y336 463 aa13.7□□□□□ -0.22
PHGDH-211ENST00000641213 COL6A6A6NMZ7 2263 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 K7EN84 100 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 S100A2P29034 98 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 RPL27AP46776 148 aaKnown RBP13.69□□□□□ -0.22
PHGDH-211ENST00000641213 LCN2P80188 198 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 S100A12P80511 92 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 ZNF90Q03938 601 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 FOXL1Q12952 345 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 PVRIGQ6DKI7 326 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 C11orf71Q6IPW1 123 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 TEX38Q6PEX7 206 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 FAM167A-AS1Q96KT0 104 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 SLC25A2Q9BXI2 301 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 ONECUT1Q9UBC0 465 aa13.69□□□□□ -0.22
PHGDH-211ENST00000641213 TRAV5A0A0B4J249 113 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 C22orf46C9J442 243 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 LY6LH3BQJ8 138 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 LIPFP07098 398 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 MFAP2P55001 183 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 PDZD11Q5EBL8 140 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 MRPL41Q8IXM3 137 aaKnown RBP13.68□□□□□ -0.22
PHGDH-211ENST00000641213 RPEQ96AT9 228 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 AMMECR1Q9Y4X0 333 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-211ENST00000641213 LY96Q9Y6Y9 160 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 TACC2O95359 2948 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 CRYBB3P26998 211 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 COMPP49747 757 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-211ENST00000641213 ACTL10Q5JWF8 245 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 OR10G8Q8NGN5 311 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-211ENST00000641213 PITPNC1Q9UKF7 332 aa13.68□□□□□ -0.22
PHGDH-211ENST00000641213 GGTLC3B5MD39 225 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 CRYGCP07315 174 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 PATE2Q6UY27 113 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 PPP1R27Q86WC6 154 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 PFDN5Q99471 154 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 A0A1W2PRE2 83 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 HELTA6NFD8 242 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 COX7A2P2O60397 106 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 APELAP0DMC3 54 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 SELENOTP62341 195 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 C10orf113Q5VZT2 155 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 ETFRF1Q6IPR1 90 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 OR1L4Q8NGR5 311 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 MISP3Q96FF7 219 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 TIMD4Q96H15 378 aa13.67□□□□□ -0.22
PHGDH-211ENST00000641213 LDLRAD2Q5SZI1 272 aa13.66□□□□□ -0.22
PHGDH-211ENST00000641213 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
PHGDH-211ENST00000641213 A0A0U1RQK1 487 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 ZNF320A2RRD8 509 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
PHGDH-211ENST00000641213 OR10D4PQ8NGN7 298 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 BTF3L4Q96K17 158 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 FBXL15Q9H469 300 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 ZNF355PQ9NSJ1 428 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 TEX22C9J3V5 150 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 BPIFB3P59826 476 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 UBE2L3P68036 154 aaKnown RBP13.65□□□□□ -0.22
PHGDH-211ENST00000641213 CENPWQ5EE01 88 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 PYY3Q5JQD4 70 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 OR1P1Q8NH06 330 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 NEU4Q8WWR8 484 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-211ENST00000641213 GSN-AS1Q9NRJ2 163 aa13.65□□□□□ -0.22
PHGDH-211ENST00000641213 GNG4P50150 75 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 RPL15P61313 204 aaKnown RBP13.64□□□□□ -0.23
PHGDH-211ENST00000641213 ARF6P62330 175 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 LY6DQ14210 128 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 TMEM183AQ8IXX5 376 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 RNF5Q99942 180 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 TNFRSF19Q9NS68 423 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 HIVEP3Q5T1R4 2406 aa13.64□□□□□ -0.23
PHGDH-211ENST00000641213 PYYP10082 97 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 FABP4P15090 132 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 LGALS4P56470 323 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 TPTE2P1Q5T6R2 138 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 XKRY2A2RUG3 117 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 SLC17A3O00476 420 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 FCN1O00602 326 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 TIMM23O14925 209 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 MOSP00540 346 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 FABP1P07148 127 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 OR5I1Q13606 314 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 TMEM116Q8NCL8 245 aa13.63□□□□□ -0.23
PHGDH-211ENST00000641213 OR11H6Q8NGC7 330 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms