RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FDCSPQ8NFU4 85 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 ZNHIT1O43257 154 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 FTH1P19P0C7X4 201 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 SAA1P0DJI8 122 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 GFRALQ6UXV0 394 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 LINC00305Q7Z4B0 112 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF596Q8TC21 504 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 PLSCR4Q9NRQ2 329 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 ONECUT1Q9UBC0 465 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 SLC17A3O00476 420 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 ATXN7O15265 892 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 TNFSF13O75888 250 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 RBP4P02753 201 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 LGALS4P56470 323 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 MOB3BQ86TA1 216 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 OCC1Q8TAD7 63 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF503-AS2A6NEH8 195 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 SP9P0CG40 484 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 PTTG1IPP53801 180 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 RBPMS2Q6ZRY4 209 aaKnown RBP4.59□□□□□ -1.67
SCN3A-210ENST00000640652 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 OR9G1Q8NH87 305 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 WFIKKN1Q96NZ8 548 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 RAB1BQ9H0U4 201 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF355PQ9NSJ1 428 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 ABCA12Q86UK0 2595 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 TEX50A0A1B0GTY4 177 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 CHRNB4P30926 498 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 PPOXP50336 477 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 RPL30P62888 115 aaKnown RBP4.59□□□□□ -1.67
SCN3A-210ENST00000640652 HAPLN4Q86UW8 402 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 RRHO14718 337 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 TCF23Q7RTU1 214 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 BPIFA4PQ86YQ2 179 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 CD177Q8N6Q3 437 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM70Q9BUB7 260 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 RNASE7Q9H1E1 156 aaKnown RBP4.59□□□□□ -1.67
SCN3A-210ENST00000640652 MRPL27Q9P0M9 148 aaKnown RBP4.59□□□□□ -1.67
SCN3A-210ENST00000640652 TRAV34A0A0B4J273 112 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 UPK2O00526 184 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 CCL8P80075 99 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 Q0VG73 95 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 FXYD3Q14802 87 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 PNKDQ8N490 385 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 SCNM1Q9BWG6 230 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 NRN1Q9NPD7 142 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 INSIG2Q9Y5U4 225 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 LEPROTL1O95214 131 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 IGKV1D-33P01593 117 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 IGKV1-33P01594 117 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 FOXG1P55316 489 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-210ENST00000640652 ATG101Q9BSB4 218 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 WDFY3Q8IZQ1 3526 aa4.59□□□□□ -1.67
SCN3A-210ENST00000640652 PPIAL4EA0A075B759 164 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 IGHV1-18A0A0C4DH31 117 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 PPIAL4DF5H284 164 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 LIPFP07098 398 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 PPIAL4FP0DN26 164 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 MIR17HGQ75NE6 70 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM105Q8N8V8 129 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 LEAP2Q969E1 77 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 C20orf144Q9BQM9 153 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 PYGO2Q9BRQ0 406 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 RPP21Q9H633 154 aaKnown RBP4.59□□□□□ -1.68
SCN3A-210ENST00000640652 PPIAL4AQ9Y536 164 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 IGKV1D-17A0A075B6S4 117 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 SLC25A17O43808 307 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 IGHG3P01860 377 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 CFHR2P36980 270 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 C9orf106Q8NAJ2 232 aa4.59□□□□□ -1.68
SCN3A-210ENST00000640652 P0C879 139 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 SLC25A48Q6ZT89 311 aaKnown RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF664Q8N3J9 261 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 OR10AG1Q8NH19 301 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 FAM181BA6NEQ2 426 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 C15orf65H3BRN8 121 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 CCDC144NLQ6NUI1 221 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 C11orf52Q96A22 123 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 CHCHD1Q96BP2 118 aaKnown RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 DCTN5Q9BTE1 182 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 PGPEP1LA6NFU8 196 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 CT83Q5H943 113 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 Q6ZPA2 131 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 PRSS3P2Q8NHM4 247 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 TSKUQ8WUA8 353 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 SNRNP40Q96DI7 357 aaKnown RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF71Q9NQZ8 489 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 MMP23AO75900 390 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 SNRPCP09234 159 aaKnown RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 ARSJQ5FYB0 599 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 NEUROG1Q92886 237 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 KLK10O43240 276 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 EGR1P18146 543 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 REG1BP48304 166 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 OR8B3Q8NGG8 313 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 OR8B2Q96RD0 313 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 CLEC7AQ9BXN2 247 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 CD69Q07108 199 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms