RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SCGB1D4Q6XE38 83 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 GGTLC1Q9BX51 225 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 C7orf69Q9H7B7 122 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 C1QTNF9P0C862 333 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 MBNL3Q9NUK0 354 aaKnown RBP14.5□□□□□ -0.09
SCARB2-223ENST00000640640 CUL9Q8IWT3 2517 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 A1L4Q6 167 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 DPRXA6NFQ7 191 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 GLRX5Q86SX6 157 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 IMMP2LQ96T52 175 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 LYL1P12980 280 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
SCARB2-223ENST00000640640 TCRBV4S1A1TA0A5B7 111 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 TRAV1-1A0A0B4J248 108 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 ZNF207O43670 478 aaKnown RBP14.49□□□□□ -0.09
SCARB2-223ENST00000640640 GPR82Q96P67 336 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 PHLDA3Q9Y5J5 127 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 TRAV3A0A0B4J244 114 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 PGPEP1LA6NFU8 196 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 ADIPOQQ15848 244 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 NUP37Q8NFH4 326 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 ANAPC10Q9UM13 185 aa14.49□□□□□ -0.09
SCARB2-223ENST00000640640 A0A1W2PRE2 83 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 IGHV1-8P0DP01 117 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 ZNF841Q6ZN19 808 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 C2orf16Q68DN1 1984 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 LOC105371267A0A1B0GV96 52 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 ZNF503-AS2A6NEH8 195 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 PYYP10082 97 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 BTF3P20290 206 aaKnown RBP14.48□□□□□ -0.09
SCARB2-223ENST00000640640 C2orf83Q53S99 150 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 DMRTA2Q96SC8 542 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 GPX1P07203 203 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 Q9H3A6 140 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 ZFP30Q9Y2G7 519 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 HLA-DRB1P01911 266 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 TCF24Q7RTU0 167 aa14.48□□□□□ -0.09
SCARB2-223ENST00000640640 FREM1Q5H8C1 2179 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 IGHV3-66A0A0C4DH42 116 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 SCGB1C2P0DMR2 95 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 RPRMLQ8N4K4 120 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 IGHV2-26A0A0B4J1V2 119 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 DDTP30046 118 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 HERVK_113P61574 105 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 GAFA1Q96PS6 74 aa14.47□□□□□ -0.09
SCARB2-223ENST00000640640 STAG3L2P0CL84 134 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 STAG3L3P0CL85 134 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 ZNF585BQ52M93 769 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 LEMD1Q68G75 181 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 TEX29Q8N6K0 151 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 AUP1Q9Y679 476 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 RNASE7Q9H1E1 156 aaKnown RBP14.46□□□□□ -0.09
SCARB2-223ENST00000640640 MAP1LC3AQ9H492 121 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 RNF224P0DH78 156 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 CLEC19AQ6UXS0 136 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 OCC1Q8TAD7 63 aa14.46□□□□□ -0.09
SCARB2-223ENST00000640640 TCTAP57738 103 aa14.46□□□□□ -0.1
SCARB2-223ENST00000640640 SPATA45Q537H7 98 aa14.46□□□□□ -0.1
SCARB2-223ENST00000640640 FOLR2P14207 255 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 GTF2H5Q6ZYL4 71 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 CENPVQ7Z7K6 275 aaPredicted RBP14.45□□□□□ -0.1
SCARB2-223ENST00000640640 RNF125Q96EQ8 232 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 LIME1Q9H400 295 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 HOXA5P20719 270 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 NMUP48645 174 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H1AQ02539 215 aaPredicted RBP14.45□□□□□ -0.1
SCARB2-223ENST00000640640 OR10AG1Q8NH19 301 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 CBY3A6NI87 242 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 FMC1Q96HJ9 113 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 ANKHD1Q8IWZ3 2542 aaKnown RBP14.45□□□□□ -0.1
SCARB2-223ENST00000640640 NOTCH2Q04721 2471 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 A0A0G2JLM5 398 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 A0A1B0GUT8 65 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 LMO1P25800 156 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 AP5S1Q9NUS5 200 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 DMRT1Q9Y5R6 373 aa14.45□□□□□ -0.1
SCARB2-223ENST00000640640 TGFAP01135 160 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 IGLV3-1P01715 115 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 PVRIGQ6DKI7 326 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 SLC25A48Q6ZT89 311 aaKnown RBP14.44□□□□□ -0.1
SCARB2-223ENST00000640640 MED13Q9UHV7 2174 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 TRAV9-1A0A075B6T8 112 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 GNG5P63218 68 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 PRSS8Q16651 343 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 RNF138Q8WVD3 245 aa14.44□□□□□ -0.1
SCARB2-223ENST00000640640 RPP21Q9H633 154 aaKnown RBP14.44□□□□□ -0.1
SCARB2-223ENST00000640640 WDR87Q6ZQQ6 2873 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 TNFSF13O75888 250 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 RPLP1P05386 114 aaKnown RBP14.43□□□□□ -0.1
SCARB2-223ENST00000640640 Q6ZR03 302 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 TMEM167AQ8TBQ9 72 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 ATG101Q9BSB4 218 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 ZNF25P17030 456 aaPredicted RBP14.43□□□□□ -0.1
SCARB2-223ENST00000640640 IGFL3Q6UXB1 125 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 HIGD1CA8MV81 97 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 ELOVL1Q9BW60 279 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 EPDR1Q9UM22 224 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 A0A1B0GW64 132 aa14.43□□□□□ -0.1
SCARB2-223ENST00000640640 SRSF9Q13242 221 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCARB2-223ENST00000640640 LBHQ53QV2 105 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms