RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 HIGD1CA8MV81 97 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 C8orf88P0DMB2 117 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 PSG1P11464 419 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 ZNF841Q6ZN19 808 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 ZFHX2Q9C0A1 2572 aaPredicted RBP16.68■□□□□ 0.26
PMS1-222ENST00000639501 TAS2R45P59539 299 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 CT45A1Q5HYN5 189 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 RASL11AQ6T310 242 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 CT45A3Q8NHU0 189 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 ZNF596Q8TC21 504 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 TMEM70Q9BUB7 260 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 PCNX2A6NKB5 2137 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 OR2J3O76001 311 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 KIR2DS2P43631 304 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 RHOGP84095 191 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 TRIB1Q96RU8 372 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 WASHC3Q9Y3C0 194 aa16.68■□□□□ 0.26
PMS1-222ENST00000639501 COL27A1Q8IZC6 1860 aaPredicted RBP16.68■□□□□ 0.26
PMS1-222ENST00000639501 FNDC10F2Z333 226 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 J3QR06 171 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 F2RL2O00254 374 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 CD59P13987 128 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 SSBP2P81877 361 aaPredicted RBP16.67■□□□□ 0.26
PMS1-222ENST00000639501 TCF15Q12870 199 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 OR2T6Q8NHC8 308 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 LOC400499M0QZD8 3231 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 ZNF292O60281 2723 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 PSMB11A5LHX3 300 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 PPBPP02775 128 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 FOXA3P55318 350 aaPredicted RBP16.67■□□□□ 0.26
PMS1-222ENST00000639501 RNFT1Q5M7Z0 435 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 GRAMD2BQ96HH9 432 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 SGK494Q96LW2 274 aa16.67■□□□□ 0.26
PMS1-222ENST00000639501 GSX1Q9H4S2 264 aaPredicted RBP16.67■□□□□ 0.26
PMS1-222ENST00000639501 AMMECR1Q9Y4X0 333 aaPredicted RBP16.67■□□□□ 0.26
PMS1-222ENST00000639501 MUC21A0A0G2JKD1 596 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 MUC21A0A140T8X8 626 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 NUDT3O95989 172 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 ACP1P24666 158 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 SPRNQ5BIV9 151 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 MUC21Q5SSG8 566 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 BVES-AS1Q5T3Y7 98 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 OR2V2Q96R30 315 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 MCRIP2Q9BUT9 160 aaKnown RBP16.66■□□□□ 0.26
PMS1-222ENST00000639501 CST9LQ9H4G1 147 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 CALYQ9NYX4 217 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 GNG5P63218 68 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 FAM231DQ6ZW35 169 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 PRSS33Q8NF86 280 aa16.66■□□□□ 0.26
PMS1-222ENST00000639501 KLF13Q9Y2Y9 288 aaPredicted RBP16.66■□□□□ 0.26
PMS1-222ENST00000639501 OR10W1Q8NGF6 305 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 C7orf69Q9H7B7 122 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 KNTC1P50748 2209 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 A0A1B0GXF2 115 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 CBY3A6NI87 242 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 PRCDQ00LT1 54 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 TCF24Q7RTU0 167 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 ZNF329Q86UD4 541 aa16.65■□□□□ 0.26
PMS1-222ENST00000639501 IGHV1-24A0A0C4DH33 117 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 SRRM4A7MD48 611 aaKnown RBP16.64■□□□□ 0.25
PMS1-222ENST00000639501 PEX7O00628 323 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 IGKV1-16P04430 117 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 C17orf58Q2M2W7 97 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 ZNRD1Q9P1U0 126 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 ARFGEF3Q5TH69 2177 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 MGST3O14880 152 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 CR1LQ2VPA4 569 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 DSCAML1Q8TD84 2053 aa16.64■□□□□ 0.25
PMS1-222ENST00000639501 RTL8BQ17RB0 113 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 OCIAD2Q56VL3 154 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 ZC2HC1AQ96GY0 325 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 VPS25Q9BRG1 176 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 ST20Q9HBF5 79 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 DSCAMO60469 2012 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 SYS1-DBNDD2H3BUS1 97 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 CRXO43186 299 aaPredicted RBP16.63■□□□□ 0.25
PMS1-222ENST00000639501 RNASE2P10153 161 aaKnown RBP16.63■□□□□ 0.25
PMS1-222ENST00000639501 AMMECR1LQ6DCA0 310 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 DUX4L9Q6RFH8 374 aaPredicted RBP16.63■□□□□ 0.25
PMS1-222ENST00000639501 SSX8Q7RTT4 187 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 OR2Z1Q8NG97 314 aa16.63■□□□□ 0.25
PMS1-222ENST00000639501 FOXE3Q13461 319 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 INO80CQ6PI98 192 aaPredicted RBP16.62■□□□□ 0.25
PMS1-222ENST00000639501 TEX50A0A1B0GTY4 177 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 SRRM5B3KS81 715 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 IGKV3-15P01624 115 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 CECR9P0C854 216 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 FAM201AQ5SY85 155 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 LINC00322Q6ZN03 302 aaPredicted RBP16.62■□□□□ 0.25
PMS1-222ENST00000639501 DEFB125Q8N687 156 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 GCSAMQ8N6F7 178 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 ABI3Q9P2A4 366 aa16.62■□□□□ 0.25
PMS1-222ENST00000639501 HEATR1Q9H583 2144 aaKnown RBP16.61■□□□□ 0.25
PMS1-222ENST00000639501 CD46P15529 392 aa16.61■□□□□ 0.25
PMS1-222ENST00000639501 PRNDQ9UKY0 176 aa16.61■□□□□ 0.25
PMS1-222ENST00000639501 CNOT1A5YKK6 2376 aaKnown RBP16.61■□□□□ 0.25
PMS1-222ENST00000639501 C9orf172C9J069 976 aa16.61■□□□□ 0.25
PMS1-222ENST00000639501 UPK2O00526 184 aa16.61■□□□□ 0.25
PMS1-222ENST00000639501 PLAUP00749 431 aa16.61■□□□□ 0.25
PMS1-222ENST00000639501 IGHV3-48P01763 117 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms