RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 TRIB1Q96RU8 372 aa9.97□□□□□ -0.81
GFAP-228ENST00000638488 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
GFAP-228ENST00000638488 ZFHX4Q86UP3 3567 aa9.97□□□□□ -0.81
GFAP-228ENST00000638488 NKX2-8O15522 239 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 NGFP01138 241 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 OR9G9P0C7N8 305 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 MGST1P10620 155 aaKnown RBP9.96□□□□□ -0.81
GFAP-228ENST00000638488 RPL24P83731 157 aaKnown RBP9.96□□□□□ -0.81
GFAP-228ENST00000638488 KIR3DS1Q14943 382 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 EFNB3Q15768 340 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 MDS2Q8NDY4 140 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 C5orf30Q96GV9 206 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 IGF2BP2-AS1Q96M15 143 aa9.96□□□□□ -0.81
GFAP-228ENST00000638488 ZNF207O43670 478 aaKnown RBP9.96□□□□□ -0.82
GFAP-228ENST00000638488 LINC01545Q5VT33 79 aa9.96□□□□□ -0.82
GFAP-228ENST00000638488 CCDC144NLQ6NUI1 221 aa9.96□□□□□ -0.82
GFAP-228ENST00000638488 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.82
GFAP-228ENST00000638488 TPRX1Q8N7U7 411 aa9.96□□□□□ -0.82
GFAP-228ENST00000638488 POM121L2Q96KW2 1035 aa9.96□□□□□ -0.82
GFAP-228ENST00000638488 C1QTNF5Q9BXJ0 243 aa9.96□□□□□ -0.82
GFAP-228ENST00000638488 ZNF257Q9Y2Q1 563 aa9.96□□□□□ -0.82
GFAP-228ENST00000638488 FABP2P12104 132 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 CATR1Q13166 79 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 WDR31Q8NA23 367 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 PERPQ96FX8 193 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 HSPB8Q9UJY1 196 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 TSSC4Q9Y5U2 329 aaPredicted RBP9.95□□□□□ -0.82
GFAP-228ENST00000638488 DMXL1Q9Y485 3027 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 TRGV5A0A0B4J1U4 118 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 TRAV24A0A0B4J272 114 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 LINC00173Q6ZV60 143 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 H2BFWTQ7Z2G1 175 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 LINC00470Q9BZP3 86 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 SPRR3Q9UBC9 169 aa9.95□□□□□ -0.82
GFAP-228ENST00000638488 UQCRFS1P47985 274 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 NUP35Q8NFH5 326 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 PRDM14Q9GZV8 571 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 LSM4Q9Y4Z0 139 aaKnown RBP9.94□□□□□ -0.82
GFAP-228ENST00000638488 A0A1B0GXF2 115 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 SH2D7A6NKC9 451 aaPredicted RBP9.94□□□□□ -0.82
GFAP-228ENST00000638488 K7EQM0 130 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 FGF6P10767 208 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 PLP2Q04941 152 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 MEF2CQ06413 473 aaPredicted RBP9.94□□□□□ -0.82
GFAP-228ENST00000638488 EIF4EBP1Q13541 118 aaPredicted RBP9.94□□□□□ -0.82
GFAP-228ENST00000638488 OR4A16Q8NH70 328 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 MS4A5Q9H3V2 200 aa9.94□□□□□ -0.82
GFAP-228ENST00000638488 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 PRSS46E5RG02 174 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 SIVA1O15304 175 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 AGFG2O95081 481 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 ADH4P08319 380 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 FABP6P51161 128 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 ZNF816Q0VGE8 651 aaPredicted RBP9.93□□□□□ -0.82
GFAP-228ENST00000638488 RTL8BQ17RB0 113 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 CEACAM21Q3KPI0 293 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 SPATA31B1PQ5VZV4 182 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 OR9G4Q8NGQ1 327 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 LRRC29Q8WV35 223 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 FGF23Q9GZV9 251 aaPredicted RBP9.93□□□□□ -0.82
GFAP-228ENST00000638488 DLL3Q9NYJ7 618 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 SPENQ96T58 3664 aaKnown RBP9.93□□□□□ -0.82
GFAP-228ENST00000638488 ZNF788Q6ZQV5 615 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 TAAR6Q96RI8 345 aa9.93□□□□□ -0.82
GFAP-228ENST00000638488 GEMIN7Q9H840 131 aaKnown RBP9.93□□□□□ -0.82
GFAP-228ENST00000638488 TNRC6AQ8NDV7 1962 aaKnown RBP9.92□□□□□ -0.82
GFAP-228ENST00000638488 RBMXL2O75526 392 aaKnown RBP9.92□□□□□ -0.82
GFAP-228ENST00000638488 FOXH1O75593 365 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 CA1P00915 261 aaPredicted RBP9.92□□□□□ -0.82
GFAP-228ENST00000638488 MED12LQ86YW9 2145 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 TMEM178AQ8NBL3 297 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 OR2Z1Q8NG97 314 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 OR4X2Q8NGF9 303 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 OR52E5Q8NH55 327 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 DUSP13Q9UII6 198 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 TSPAN13O95857 204 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 NRN1LQ496H8 165 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 TIMM23BQ5SRD1 257 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 COLCA1Q6ZS62 124 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 STPG3Q8N7X2 389 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 IDI2-AS1Q9NZ38 188 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 RABAC1Q9UI14 185 aa9.92□□□□□ -0.82
GFAP-228ENST00000638488 CNOT1A5YKK6 2376 aaKnown RBP9.91□□□□□ -0.82
GFAP-228ENST00000638488 IGHV3-64DA0A0J9YX35 117 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
GFAP-228ENST00000638488 SSX8Q7RTT4 187 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 TEX45Q8NA69 505 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 FAM168AQ92567 244 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 ZNF488Q96MN9 340 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 LAMA5O15230 3695 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 WT1P19544 449 aaPredicted RBP9.91□□□□□ -0.82
GFAP-228ENST00000638488 FOXE3Q13461 319 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 PSG5Q15238 335 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 SPINK9Q5DT21 86 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 MDP1Q86V88 176 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 BOD1L2Q8IYS8 172 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 BLNKQ8WV28 456 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms