RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	TIMM23	O14925	209 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	HLA-DQA1	P01909	254 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PFN2	P35080	140 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276		Q5BKY6	102 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	FREM3	P0C091	2139 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF98	A6NK75	572 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF729	A6NN14	1252 aa	Predicted RBP	13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	STPG2	Q8N412	459 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276		Q9HAA7	133 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RGPD4	Q7Z3J3	1758 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276		A6NNC1	897 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MS4A6A	Q9H2W1	248 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	HIGD1C	A8MV81	97 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PYY	P10082	97 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	DDT	P30046	118 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RBM38	Q9H0Z9	239 aa	Known RBP	13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	NXPH4	O95158	308 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	C1orf53	Q5VUE5	145 aa		13.74	□□□□□ -0.21
CACNA1A-238	ENST00000637276	C22orf46	C9J442	243 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	TBR1	Q16650	682 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	OSR1	Q8TAX0	266 aa	Predicted RBP	13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	SNHG12	Q9BXW3	62 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	SLC25A45	Q8N413	288 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	GATAD1	Q8WUU5	269 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	CHD3	Q12873	2000 aa	Known RBP	13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MYO7B	Q6PIF6	2116 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	SERF2	P84101	59 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	FAM27B	Q5VT28	67 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	BAALC	Q8WXS3	180 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	CD55	P08174	381 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	COL6A6	A6NMZ7	2263 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	IGKV1-8	A0A0C4DH67	115 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	CD5L	O43866	347 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	FAM181A	Q8N9Y4	354 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	C5orf66	Q9H5L9	145 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF876P	Q49A33	203 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	OR52E5	Q8NH55	327 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	GGACT	Q9BVM4	153 aa		13.73	□□□□□ -0.21
CACNA1A-238	ENST00000637276	KMT2E	Q8IZD2	1858 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RREB1	Q92766	1687 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	C17orf98	A8MV24	154 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	HOXD4	P09016	255 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF146	Q15072	292 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	C5orf30	Q96GV9	206 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	LHFPL6	Q9Y693	200 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	DOCK11	Q5JSL3	2073 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	VMO1	Q7Z5L0	202 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PEF1	Q9UBV8	284 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	EPOP	A6NHQ4	379 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	DEPP	Q9NTK1	212 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	DPM3	Q9P2X0	92 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	TRAV41	A0A0B4J266	112 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	IGHV3-38	A0A0C4DH36	116 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	UCP3	P55916	312 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	SIGLEC15	Q6ZMC9	328 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	TIMM17A	Q99595	171 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF407	Q9C0G0	2248 aa		13.72	□□□□□ -0.21
CACNA1A-238	ENST00000637276	TMEM54	Q969K7	222 aa		13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	SPX	Q9BT56	116 aa		13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ELOVL5	Q9NYP7	299 aa		13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	HLA-DQB1	P01920	261 aa		13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	KIAA1551	Q9HCM1	1747 aa		13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PTP4A3	O75365	173 aa		13.71	□□□□□ -0.21
CACNA1A-238	ENST00000637276	NOTCH3	Q9UM47	2321 aa		13.71	□□□□□ -0.22
CACNA1A-238	ENST00000637276		A8MXK9	166 aa		13.71	□□□□□ -0.22
CACNA1A-238	ENST00000637276	OR10W1	Q8NGF6	305 aa		13.71	□□□□□ -0.22
CACNA1A-238	ENST00000637276	PAPPA2	Q9BXP8	1791 aa		13.71	□□□□□ -0.22
CACNA1A-238	ENST00000637276	MSRB2	Q9Y3D2	182 aa		13.71	□□□□□ -0.22
CACNA1A-238	ENST00000637276	MPTX1	A8MV57	137 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ATP6V0B	Q99437	205 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	CITED1	Q99966	193 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	IFITM3	Q01628	133 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	RPP21	Q9H633	154 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	NIT1	Q86X76	327 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	DKK4	Q9UBT3	224 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	COX6A1	P12074	109 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ADM	P35318	185 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ZNF345	Q14585	488 aa		13.7	□□□□□ -0.22
CACNA1A-238	ENST00000637276	TRAV5	A0A0B4J249	113 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	SMKR1	H3BMG3	65 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ZNF561-AS1	K7EIQ3	104 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	CECR9	P0C854	216 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	H2BFS	P57053	126 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	CA11	O75493	328 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ERCC8	Q13216	396 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	NKAPP1	Q8N9T2	125 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	KIF26B	Q2KJY2	2108 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	MLNR	O43193	412 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	DOCK8	Q8NF50	2099 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	C1QA	P02745	245 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	RUSC1-AS1	Q66K80	236 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	MTURN	Q8N3F0	131 aa		13.69	□□□□□ -0.22
CACNA1A-238	ENST00000637276	PKD1L3	Q7Z443	1732 aa		13.68	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ACP7	Q6ZNF0	438 aa		13.68	□□□□□ -0.22
CACNA1A-238	ENST00000637276	PILRB	Q9UKJ0	227 aa		13.68	□□□□□ -0.22
CACNA1A-238	ENST00000637276	AQP3	Q92482	292 aa		13.68	□□□□□ -0.22
CACNA1A-238	ENST00000637276	ASPHD2	Q6ICH7	369 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms