RNA–Protein interactions for RNA: ENST00000637015.1

ARID1B-223, Transcript of AT-rich interaction domain 1B, human

APPRIS ALT2 TSL 5

Gene ARID1B, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1B-223	ENST00000637015	CHCHD1	Q96BP2	118 aa	Known RBP	10.27	□□□□□ -0.76
ARID1B-223	ENST00000637015	C5orf30	Q96GV9	206 aa		10.27	□□□□□ -0.76
ARID1B-223	ENST00000637015	CHCHD5	Q9BSY4	110 aa		10.27	□□□□□ -0.76
ARID1B-223	ENST00000637015	SPRR3	Q9UBC9	169 aa		10.27	□□□□□ -0.76
ARID1B-223	ENST00000637015	TRIP12	Q14669	1992 aa	Predicted RBP	10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	C9orf139	Q6ZV77	190 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	ST6GALNAC3	Q8NDV1	305 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	COL4A5	P29400	1685 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	SRRM5	B3KS81	715 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	SLC17A3	O00476	420 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	NSUN5P1	Q3KNT7	163 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	HEPN1	Q6WQI6	88 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	SAP30	O75446	220 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	EGR1	P18146	543 aa		10.27	□□□□□ -0.77
ARID1B-223	ENST00000637015	LRRC37A	A6NMS7	1700 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	IGHV2-26	A0A0B4J1V2	119 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	NDUFS8	O00217	210 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	NDUFA3	O95167	84 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	ZNF415	Q09FC8	603 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	ZNF585B	Q52M93	769 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	DPH3P1	Q9H4G8	78 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015		A0A087WX48	190 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	FAM223B	A6NKX1	122 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	FAM223A	Q8IWN6	122 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	MBNL3	Q9NUK0	354 aa	Known RBP	10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	GATA3	P23771	443 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	MUC21	Q5SSG8	566 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	TPTE2P1	Q5T6R2	138 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	RPL36A	P83881	106 aa	Known RBP	10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	ATOH7	Q8N100	152 aa		10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	RPL36AL	Q969Q0	106 aa	Known RBP	10.26	□□□□□ -0.77
ARID1B-223	ENST00000637015	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	PGPEP1L	A6NFU8	196 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	PAX2	Q02962	417 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	VMO1	Q7Z5L0	202 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	OR5A1	Q8NGJ0	315 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	SRSF8	Q9BRL6	282 aa	Known RBP	10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	CDK2AP2	O75956	126 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	DEPP	Q9NTK1	212 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015		A0A1B0GV72	72 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	CKS1B	P61024	79 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	OVOL2	Q9BRP0	275 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	WDR83OS	Q9Y284	106 aa		10.25	□□□□□ -0.77
ARID1B-223	ENST00000637015	IGHV1-8	P0DP01	117 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	CRYGS	P22914	178 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	S100A7L2	Q5SY68	101 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	TSKU	Q8WUA8	353 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	ZNF837	Q96EG3	531 aa	Predicted RBP	10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	GNB1L	Q9BYB4	327 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	RPL23	P62829	140 aa	Known RBP	10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	TEX38	Q6PEX7	206 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	GGTLC3	B5MD39	225 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	ID3	Q02535	119 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	TMEM170A	Q8WVE7	144 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	LINC00477	Q96M19	166 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	SPCS1	Q9Y6A9	102 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	PRR32	B1ATL7	298 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	APOM	O95445	188 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	RASL11A	Q6T310	242 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	COQ2	Q96H96	371 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	TRGV9	Q99603	122 aa		10.24	□□□□□ -0.77
ARID1B-223	ENST00000637015	TMEM238	C9JI98	176 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	TMEM178B	H3BS89	294 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	SLC25A48	Q6ZT89	311 aa	Known RBP	10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	RCHY1	Q96PM5	261 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015		A0A1B0GWJ7	208 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	LINC01356	Q8N9X3	169 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	LYZL4	Q96KX0	146 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	ASCC3	Q8N3C0	2202 aa	Known RBP	10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	CTAG1A	P78358	180 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	UNQ6494/PRO21346	Q6UXR6	183 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	FLVCR1-AS1	Q8TAF5	88 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	PLEKHB2	Q96CS7	222 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	AMBP	P02760	352 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	TDGF1P3	P51864	188 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	LY6D	Q14210	128 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	HAPLN4	Q86UW8	402 aa		10.23	□□□□□ -0.77
ARID1B-223	ENST00000637015	ERVH48-1	M5A8F1	160 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	LINC00614	P0C842	121 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	CD33	P20138	364 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	GATA2	P23769	480 aa	Predicted RBP	10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	FBLN7	Q53RD9	439 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	WDR90	Q96KV7	1748 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	INS	P01308	110 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	IGKC	P01834	107 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	EFNB3	Q15768	340 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	NIT1	Q86X76	327 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	LYPD1	Q8N2G4	141 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	GLMP	Q8WWB7	406 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	RASL10A	Q92737	203 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	TUBGCP6	Q96RT7	1819 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	NUP214	P35658	2090 aa	Predicted RBP	10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	IGHV1-3	A0A0C4DH29	117 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	NAPSA	O96009	420 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	TMEM155	Q4W5P6	130 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	LAIR2	Q6ISS4	152 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	MBD3L1	Q8WWY6	194 aa		10.22	□□□□□ -0.77
ARID1B-223	ENST00000637015	NRN1	Q9NPD7	142 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms