RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PDE6HQ13956 83 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 CENPWQ5EE01 88 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 C19orf35Q6ZS72 473 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 MIR17HGQ75NE6 70 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 C5orf24Q7Z6I8 188 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 SNURFLB1AK76 121 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 IGHV2-5P01817 119 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 SELLP14151 372 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 FXYD3Q14802 87 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 COA6Q5JTJ3 125 aaKnown RBP3.7□□□□□ -1.82
SCN1A-210ENST00000635776 LINC00305Q7Z4B0 112 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 RPRMLQ8N4K4 120 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 MS4A10Q96PG2 267 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM14CQ9P0S9 112 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 PGPA6NDG6 321 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 NCBP2LA6PVI3 153 aaKnown RBP3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BKO60814 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BJP06899 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BOP23527 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BBP33778 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BDP58876 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BCP62807 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST2H2BEQ16778 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BHQ93079 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BNQ99877 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BMQ99879 126 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 CEP250Q9BV73 2442 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM183BQ1AE95 376 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF253O75346 499 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 YPEL3P61236 119 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-210ENST00000635776 RELQ04864 619 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF295-AS1Q8N0V1 137 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 OR11H6Q8NGC7 330 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 TNRC6BQ9UPQ9 1833 aaKnown RBP3.7□□□□□ -1.82
SCN1A-210ENST00000635776 IGKV1D-33P01593 117 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 IGKV1-33P01594 117 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 CLEC2AQ6UVW9 174 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 TRAV3A0A0B4J244 114 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 IZUMO1RA6ND01 250 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 CIARTQ8N365 385 aaPredicted RBP3.69□□□□□ -1.82
SCN1A-210ENST00000635776 Q8NA96 180 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 GFRA4Q9GZZ7 299 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 GSN-AS1Q9NRJ2 163 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SDK2Q58EX2 2172 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 A0A1W2PS18 150 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 COL8A1P27658 744 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 PMCHL1Q16048 86 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 OR10J3Q5JRS4 329 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF562Q6V9R5 426 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SEPSECSQ9HD40 501 aaKnown RBP3.69□□□□□ -1.82
SCN1A-210ENST00000635776 FER1L5A0AVI2 2057 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 EXPH5Q8NEV8 1989 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 PROP1O75360 226 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ACTL10Q5JWF8 245 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 IGFBPL1Q8WX77 278 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 RAXQ9Y2V3 346 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ST6GALNAC6Q969X2 333 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 C5orf30Q96GV9 206 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 EPDR1Q9UM22 224 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SPTBN2O15020 2390 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 PRSS46E5RG02 174 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 IGLV1-47P01700 117 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 IGKV1-16P04430 117 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 BRWD1-AS2P59051 145 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ARF6P62330 175 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 MSMPQ1L6U9 139 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 EEF1AKMT3Q96AZ1 226 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ELOVL1Q9BW60 279 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 FBXL15Q9H469 300 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 C21orf62Q9NYP8 219 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF492Q9P255 531 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 RABAC1Q9UI14 185 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 POLEQ07864 2286 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 NDUFB8O95169 186 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 APCSP02743 223 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 NHLH1Q02575 133 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF343Q6P1L6 599 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 TOMM20LQ6UXN7 152 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
SCN1A-210ENST00000635776 MRPL18Q9H0U6 180 aaKnown RBP3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SRCAPQ6ZRS2 3230 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SCO2A0A1W2PP80 73 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 NPIPB5A8MRT5 1133 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 CRYGCP07315 174 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 SP5Q6BEB4 398 aaPredicted RBP3.69□□□□□ -1.82
SCN1A-210ENST00000635776 DTX2Q86UW9 622 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 GATA3P23771 443 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 C5orf64Q2M2E5 130 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 OR8I2Q8N0Y5 310 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 OCC1Q8TAD7 63 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF48Q96MX3 618 aaPredicted RBP3.69□□□□□ -1.82
SCN1A-210ENST00000635776 GPR61Q9BZJ8 451 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 HTTP42858 3142 aa3.69□□□□□ -1.82
SCN1A-210ENST00000635776 ATXN7O15265 892 aaPredicted RBP3.68□□□□□ -1.82
SCN1A-210ENST00000635776 UBE2E1P51965 193 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 VN1R17PQ8TDU5 208 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TSKUQ8WUA8 353 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms