RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PRCDQ00LT1 54 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 THAP8Q8NA92 274 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 COL6A6A6NMZ7 2263 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 MYLKQ15746 1914 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 TRBV7-1A0A0A6YYK4 115 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 B4DSR2 109 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 GRIFINA4D1Z8 144 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 E9PLN8 166 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 CGAP01215 116 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 IGKV1D-16P01601 117 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 ZAR1Q86SH2 424 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 ERG28Q9UKR5 140 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 DYSFO75923 2080 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 KIAA1551Q9HCM1 1747 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 CACNA1IQ9P0X4 2223 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 FXYD1O00168 92 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 IGHMP01871 453 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 MESP2Q0VG99 397 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 XAF1Q6GPH4 301 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 NIT1Q86X76 327 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 AQP3Q92482 292 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 REPIN1Q9BWE0 567 aaKnown RBP4.67□□□□□ -1.66
SCN1A-209ENST00000635750 DTX4Q9Y2E6 619 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 TSC2P49815 1807 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 IGHV3OR16-8A0A075B7F1 116 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 HIGD1CA8MV81 97 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 CD5LO43866 347 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 RASL11AQ6T310 242 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 LCNL1Q6ZST4 164 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM133Q9H2Q1 129 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 KLHDC2Q9Y2U9 406 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 LHFPL6Q9Y693 200 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 TRAV41A0A0B4J266 112 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 A0A0U1RRA0 63 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 LDLRAD4O15165 306 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 IGFBP2P18065 325 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 FOXA3P55318 350 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-209ENST00000635750 LCN12Q6JVE5 192 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TEX43Q6ZNM6 134 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 LINC01356Q8N9X3 169 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 Q96M66 194 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 DENND4AQ7Z401 1863 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-209ENST00000635750 IZUMO1RA6ND01 250 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 CEP290O15078 2479 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM190Q8WZ59 177 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 GGTLC1Q9BX51 225 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 IGHV3-64A0A075B6Q5 118 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 CCL1P22362 96 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 CBLN1P23435 193 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 LAGE3Q14657 143 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 C2orf68Q2NKX9 166 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 LINC01559Q495D7 138 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 GFI1BQ5VTD9 330 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 PLXND1Q9Y4D7 1925 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TNRC6CQ9HCJ0 1690 aaKnown RBP4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TRAV9-1A0A075B6T8 112 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 UCP1P25874 307 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TRAF4Q9BUZ4 470 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-209ENST00000635750 NHSL1Q5SYE7 1610 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 PSPNO60542 156 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 UMODP07911 640 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 ACTL10Q5JWF8 245 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 C9orf62Q8N4C0 152 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 C5orf30Q96GV9 206 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 ADAMTSL3P82987 1691 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 CLPSP04118 112 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 INAFM2P0DMQ5 153 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 DAD1P61803 113 aa4.66□□□□□ -1.66
SCN1A-209ENST00000635750 MCRIP2Q9BUT9 160 aaKnown RBP4.66□□□□□ -1.66
SCN1A-209ENST00000635750 TEX48A0A1B0GUV7 120 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 A8MWV9 139 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 TIMM23O14925 209 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 NDUFS5O43920 106 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 IGKCP01834 107 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 OR9G9P0C7N8 305 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 CFHR1Q03591 330 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 FBLN7Q53RD9 439 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 PLEKHB2Q96CS7 222 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 SPSB3Q6PJ21 355 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 USMG5Q96IX5 58 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 DERL1Q9BUN8 251 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 ALPK2Q86TB3 2170 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 EVI2AP22794 236 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 NANOS3P60323 173 aaKnown RBP4.65□□□□□ -1.66
SCN1A-209ENST00000635750 TNFRSF14Q92956 283 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 GPHA2Q96T91 129 aa4.65□□□□□ -1.66
SCN1A-209ENST00000635750 IQCF6A8MYZ5 107 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 SPACA3Q8IXA5 215 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 SP7Q8TDD2 431 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-209ENST00000635750 WFDC12Q8WWY7 111 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 CACNA1BQ00975 2339 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 IGHV3-73A0A0B4J1V6 119 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 F5H768 121 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 CRYBA2P53672 197 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 NPC2P61916 151 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 TMEM155Q4W5P6 130 aa4.65□□□□□ -1.67
SCN1A-209ENST00000635750 VMO1Q7Z5L0 202 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms