RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MAS1LP35410 378 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ETV1P50549 477 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 INSL3P51460 131 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 RND2P52198 227 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 EDDM3BP56851 147 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR12D2P58182 307 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 CXCR4P61073 352 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 HERVK_113P61574 105 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 UNC119Q13432 240 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 APOFQ13790 326 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 EDDM3AQ14507 147 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 GINS1Q14691 196 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 KIR2DS1Q14954 304 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 GRK1Q15835 563 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 POU2AF1Q16633 256 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ZSCAN26Q16670 478 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 BCL2L15Q5TBC7 163 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 GPR107Q5VW38 600 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 NXNL2Q5VZ03 156 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ELP2Q6IA86 826 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ASCL4Q6XD76 172 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 LINC00322Q6ZN03 302 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 PLEKHG7Q6ZR37 379 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 SLC25A26Q70HW3 274 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 LYPD6Q86Y78 171 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 CBLN2Q8IUK8 224 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 SBSPONQ8IVN8 264 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF695Q8IW36 515 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ENTHD1Q8IYW4 607 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 SAXO1Q8IYX7 474 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 LINC00311Q8N616 119 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 DRAM1Q8N682 238 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF676Q8N7Q3 588 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ASCC1Q8N9N2 400 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 CHST4Q8NCG5 386 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR51D1Q8NGF3 324 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR51A4Q8NGJ6 313 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR2T27Q8NH04 317 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR10AC1Q8NH08 325 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR8U1Q8NH10 309 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TEX47Q8TBZ9 253 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 APH1BQ8WW43 257 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 DNAJC9Q8WXX5 260 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 PP6455Q8WZ26 134 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 RGP1Q92546 391 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM106AQ96A25 262 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM230Q96A57 120 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 CREB3L1Q96BA8 519 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 ADAT3Q96EY9 351 aaPredicted RBP1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 GALNT14Q96FL9 552 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 RNF185Q96GF1 192 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 CYYR1Q96J86 154 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 FAM210BQ96KR6 192 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 HSPB9Q9BQS6 159 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 PARP12Q9H0J9 701 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 GABARAPL1Q9H0R8 117 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 GAL3ST2Q9H3Q3 398 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 RHOFQ9HBH0 211 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 HMG20AQ9NP66 347 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TAS2R1Q9NYW7 299 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 OR52A1Q9UKL2 312 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 SLC7A11Q9UPY5 501 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 PSG11Q9UQ72 335 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 SAMHD1Q9Y3Z3 626 aaKnown RBP1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM14AQ9Y6G1 99 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TNCP24821 2201 aa1.63□□□□□ -2.15
SMARCB1-208ENST00000634926 TRGV10A0A0A0MS01 117 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 IGHV1-3A0A0C4DH29 117 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 A0A1W2PQL4 384 aaPredicted RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 A6NIN4 97 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 OR4C45A6NMZ5 311 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF736B4DX44 427 aaPredicted RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 PANO1I0J062 215 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 MAGEB4O15481 346 aaPredicted RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF861PO60384 105 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 HSBP1O75506 76 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 SC5DO75845 299 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 GATBO75879 557 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 SULT1C4O75897 302 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 HPRT1P00492 218 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 OXTP01178 125 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 IGKV1D-33P01593 117 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 IGKV1-33P01594 117 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 IGLV1-51P01701 117 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 HLA-DRB1P01911 266 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 MRPL3P09001 348 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 PMCHP20382 165 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 BRS3P32247 399 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 NUP62P37198 522 aaPredicted RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 CEACAM3P40198 252 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 CEACAM6P40199 344 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 CXCL5P42830 114 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 KCNJ3P48549 501 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 RBP2P50120 134 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 RAB7AP51149 207 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 DAPP51397 102 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF138P52744 262 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 AESQ08117 197 aa1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 DYNC1I2Q13409 638 aaKnown RBP1.62□□□□□ -2.15
SMARCB1-208ENST00000634926 MADCAM1Q13477 382 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms