RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 SCAF4O95104 1147 aaKnown RBP11.83□□□□□ -0.52
LINC00339-207ENST00000634712 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 LAMTOR1Q6IAA8 161 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 SLC16A13Q7RTY0 426 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 NOXA1Q86UR1 476 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 TMEM61Q8N0U2 210 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 OR1S1Q8NH92 325 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 TRAV25A0A0B4J276 109 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 DUXBA0A1W2PPF3 345 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 SFT2D2O95562 160 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 NMSQ5H8A3 153 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 PVRIGQ6DKI7 326 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 SLC24A4Q8NFF2 622 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
LINC00339-207ENST00000634712 A0A1B0GU03 582 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 TMEM50AO95807 157 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 IFNA10P01566 189 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 CD7P09564 240 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 PPP1R1AQ13522 171 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 BSXQ3C1V8 233 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 C2orf83Q53S99 150 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 C7orf50Q9BRJ6 194 aaKnown RBP11.81□□□□□ -0.52
LINC00339-207ENST00000634712 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
LINC00339-207ENST00000634712 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 NDUFB6O95139 128 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 IL7P13232 177 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
LINC00339-207ENST00000634712 MLANAQ16655 118 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 OR4X1Q8NH49 305 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 RNASEH2CQ8TDP1 164 aaKnown RBP11.8□□□□□ -0.52
LINC00339-207ENST00000634712 DTD1Q8TEA8 209 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 WWC2-AS2Q96NR7 200 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 SDHCQ99643 169 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-207ENST00000634712 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 U3KQ87 197 aa11.8□□□□□ -0.52
LINC00339-207ENST00000634712 TRAV30A0A087WSZ9 112 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 CLN5O75503 358 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 NPY1RP25929 384 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 BMI1P35226 326 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 ZNF600Q6ZNG1 722 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 DEFB125Q8N687 156 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 LRTM2Q8N967 370 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 TMEM116Q8NCL8 245 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 OR10C1Q96KK4 312 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 RBKSQ9H477 322 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 FNDC4Q9H6D8 234 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-207ENST00000634712 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 TMED3Q9Y3Q3 217 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 HOXB5P09067 269 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 SLC25A4P12235 298 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 SPAG8Q99932 426 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-207ENST00000634712 RHPN1-AS1Q9BWJ2 59 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 FLVCR2Q9UPI3 526 aa11.79□□□□□ -0.52
LINC00339-207ENST00000634712 PUS1Q9Y606 427 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00339-207ENST00000634712 TSPAN4O14817 238 aa11.78□□□□□ -0.52
LINC00339-207ENST00000634712 MED6O75586 246 aa11.78□□□□□ -0.52
LINC00339-207ENST00000634712 SLC25A6P12236 298 aa11.78□□□□□ -0.52
LINC00339-207ENST00000634712 COQ8AQ8NI60 647 aa11.78□□□□□ -0.52
LINC00339-207ENST00000634712 SRD5A3Q9H8P0 318 aa11.78□□□□□ -0.52
LINC00339-207ENST00000634712 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.53
LINC00339-207ENST00000634712 C9orf170A2RU37 121 aa11.77□□□□□ -0.53
LINC00339-207ENST00000634712 CHEK1O14757 476 aa11.77□□□□□ -0.53
LINC00339-207ENST00000634712 IFNA4P05014 189 aa11.77□□□□□ -0.53
LINC00339-207ENST00000634712 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-207ENST00000634712 HAGHQ16775 308 aa11.77□□□□□ -0.53
LINC00339-207ENST00000634712 C4orf46Q504U0 113 aa11.77□□□□□ -0.53
LINC00339-207ENST00000634712 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.53
LINC00339-207ENST00000634712 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 OR4C46A6NHA9 309 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 FAM90A26D6RGX4 464 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 IFNA21P01568 189 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 OR4E1P0C645 316 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 NPPCP23582 126 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 RND2P52198 227 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 TIGITQ495A1 244 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 GGNBP1Q5YKI7 109 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 OR1S2Q8NGQ3 325 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 RNF2Q99496 336 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 TM2D3Q9BRN9 247 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
LINC00339-207ENST00000634712 PAIP2BQ9ULR5 123 aaKnown RBP11.76□□□□□ -0.53
LINC00339-207ENST00000634712 LYRM1O43325 122 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 PITX3O75364 302 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 CD5P06127 495 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 ANXA7P20073 488 aaKnown RBP11.75□□□□□ -0.53
LINC00339-207ENST00000634712 OR10J1P30954 320 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 RAB11AP62491 216 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 PAFAH1B2P68402 229 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 RPP30P78346 268 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms