RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 TEX38Q6PEX7 206 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 C1QL2Q7Z5L3 287 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 CIARTQ8N365 385 aaPredicted RBP5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 NEUROG1Q92886 237 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 THSD7AQ9UPZ6 1657 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A1W2PR77 199 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 IGFBP2P18065 325 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 CA7P43166 264 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 Q5PR19 223 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 PVRIGQ6DKI7 326 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 TMEM190Q8WZ59 177 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.55
SRGAP1-207ENST00000631006 CCL3L1P16619 93 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 GFI1BQ5VTD9 330 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 NCOR1O75376 2440 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 PLCE1Q9P212 2302 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A0G2JMM0 328 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A1W2PPB8 328 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A1W2PRS3 328 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 KIR3DP1A8MWS1 328 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 KIAA1644Q3SXP7 199 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 GATD1Q8NB37 220 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 Q96M66 194 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 OTORQ9NRC9 128 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 HBDP02042 147 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 CELA3BP08861 270 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 OR9G9P0C7N8 305 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 AGAP20933 346 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 PIP4P2Q8N4L2 257 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 FAM169BQ8N8A8 192 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 Q96MF0 132 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 IGLV1-36A0A0B4J1U3 117 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A1B0GW15 77 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 CLPSP04118 112 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 RPL36AP83881 106 aaKnown RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 C8orf82Q6P1X6 216 aaPredicted RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 CBLN2Q8IUK8 224 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 RPL36ALQ969Q0 106 aaKnown RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 RPP21Q9H633 154 aaKnown RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 IGKV1-8A0A0C4DH67 115 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 FABP5P3A8MUU1 101 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 IQCF6A8MYZ5 107 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 PRCDQ00LT1 54 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 RFLNBQ8N5W9 214 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 MCRIP2Q9BUT9 160 aaKnown RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 SPTAN1Q13813 2472 aaKnown RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A1B0GUT8 65 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 RNF223E7ERA6 249 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 TIMM23O14925 209 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 PSPNO60542 156 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 XAF1Q6GPH4 301 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 MORN3Q6PF18 240 aaPredicted RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 RMI2Q96E14 147 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 ANAPC10Q9UM13 185 aa5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 CHCHD2Q9Y6H1 151 aaPredicted RBP5.39□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A1B0GV72 72 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 SS18Q15532 418 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 MRAPQ8TCY5 172 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 SDHCQ99643 169 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 C12orf77C9JDV5 145 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 DAD1P61803 113 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 Q6AWC8 147 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 DYSFO75923 2080 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 TRAV2A0A0B4J234 112 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 C22orf46C9J442 243 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 F5H768 121 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 H3BUX3 64 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 MESP2Q0VG99 397 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 LINC00587B1AMM8 73 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 PAX4O43316 350 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 CGAP01215 116 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 UMODP07911 640 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ST6GALNAC3Q8NDV1 305 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 CITED2Q99967 270 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 P2RY4P51582 365 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 SRSF1Q07955 248 aaKnown RBP eCLIP5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ZNF672Q499Z4 452 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 LCN12Q6JVE5 192 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 BRD3OSQ6XYD6 125 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ATOH7Q8N100 152 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 RNF125Q96EQ8 232 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 SAA2-SAA4A0A096LPE2 208 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 SAA2P0DJI9 122 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 DEFB130BP0DP73 79 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 DEFB130AP0DP74 79 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 SRSF4Q08170 494 aaKnown RBP5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 GGACTQ9BVM4 153 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 CYSLTR1Q9Y271 337 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ZNF257Q9Y2Q1 563 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 IGHV3-64A0A075B6Q5 118 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 LHX2P50458 406 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ERCC8Q13216 396 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ORMDL3Q8N138 153 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 MS4A6AQ9H2W1 248 aa5.38□□□□□ -1.55
SRGAP1-207ENST00000631006 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
SRGAP1-207ENST00000631006 APOC4P55056 127 aa5.37□□□□□ -1.55
SRGAP1-207ENST00000631006 WFIKKN1Q96NZ8 548 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms