RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 TERB2Q8NHR7 220 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 PHLDA1Q8WV24 401 aaPredicted RBP9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 ABHD1Q96SE0 405 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 RARRES2Q99969 163 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 PDCD10Q9BUL8 212 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 MS4A6AQ9H2W1 248 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 COPZ2Q9P299 210 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 EXTL2Q9UBQ6 330 aa9.14□□□□□ -0.95
SOX2-OT-247ENST00000628347 A0A1B0GU03 582 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 CLN5O75503 358 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 HOXA1P49639 335 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 PPP5CP53041 499 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 TAS2R19P59542 299 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 SSBP1Q04837 148 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 FAM219AQ8IW50 185 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR13C8Q8NGS7 320 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 RRNAD1Q96FB5 475 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 NAA50Q9GZZ1 169 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-247ENST00000628347 A0A0G2JRQ6 117 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 A0A1W2PS18 150 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 GABARAPH6UMI1 98 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 DNASE2O00115 360 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 SCGB2A1O75556 95 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 RAB3DO95716 219 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 SMIM18P0DKX4 95 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 CRYBB3P26998 211 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 ETV6P41212 452 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 MRPS10P82664 201 aaKnown RBP9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR4D10Q8NGI6 311 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR11H2Q8NH07 326 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 MFFQ9GZY8 342 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 TMEM222Q9H0R3 208 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 ENY2Q9NPA8 101 aa9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 MRPL36Q9P0J6 103 aaKnown RBP9.12□□□□□ -0.95
SOX2-OT-247ENST00000628347 TRAV30A0A087WSZ9 112 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 CDS2O95674 445 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 NPPCP23582 126 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 OPRK1P41145 380 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 DEFB131AP59861 70 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 SPCS3P61009 180 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 SURF2Q15527 256 aaPredicted RBP9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 SP6Q3SY56 376 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 GPR107Q5VW38 600 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 LGALS9CQ6DKI2 356 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 STEAP1BQ6NZ63 245 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 Q6ZRM9 215 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 FAM24BQ8N5W8 94 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 MARCH1Q8TCQ1 289 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 GRAMD2BQ96HH9 432 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 METTL26Q96S19 204 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 MIXL1Q9H2W2 232 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 DNAH17Q9UFH2 4485 aa9.11□□□□□ -0.95
SOX2-OT-247ENST00000628347 IGHV3-66A0A0C4DH42 116 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 RPS10-NUDT3A0A1W2PQS6 291 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 K7EQG2 157 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 IGKV1-17P01599 117 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 HTR2BP41595 481 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 DHODHQ02127 395 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 TMEM187Q14656 261 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 MEF2DQ14814 521 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 SCGB2B2Q4G0G5 96 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 TMEM41BQ5BJD5 291 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 RNASE11Q8TAA1 199 aaKnown RBP9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 GLYATL2Q8WU03 294 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 RTBDNQ9BSG5 229 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 NAA60Q9H7X0 242 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 U3KQE9 123 aa9.1□□□□□ -0.95
SOX2-OT-247ENST00000628347 TEX13DA0A0J9YY54 714 aaPredicted RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR5AC1P0C628 307 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 P2RY1P47900 373 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 TCTAP57738 103 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 NANOS2P60321 138 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 RBMS2Q15434 407 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 MLANAQ16655 118 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 C2orf83Q53S99 150 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 LEMD1Q68G75 181 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 STHQ8IWL8 128 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 SELENOHQ8IZQ5 122 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 OR1S2Q8NGQ3 325 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 LHFPL5Q8TAF8 219 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 SMIM4Q8WVI0 70 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 RBPMSQ93062 196 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 TMEM230Q96A57 120 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 RABL2AQ9UBK7 228 aaPredicted RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 RABAC1Q9UI14 185 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 RABL2BQ9UNT1 228 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 C14orf166Q9Y224 244 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 DNAH2Q9P225 4427 aa9.09□□□□□ -0.95
SOX2-OT-247ENST00000628347 HERC2O95714 4834 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms