RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 RPS11P62280 158 aaKnown RBP eCLIP7.6□□□□□ -1.19
USB1-216ENST00000624720 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
USB1-216ENST00000624720 LSM10Q969L4 123 aaKnown RBP7.6□□□□□ -1.19
USB1-216ENST00000624720 NMNAT3Q96T66 252 aa7.6□□□□□ -1.19
USB1-216ENST00000624720 SPANXCQ9NY87 97 aa7.6□□□□□ -1.19
USB1-216ENST00000624720 MPDZO75970 2070 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 IGKV3D-11A0A0A0MRZ8 115 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 hDV102S1A0JD36 115 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 SYS1-DBNDD2H3BUS1 97 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 C2orf91Q6ZV80 131 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 PPP1R32Q7Z5V6 425 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 ZNF695Q8IW36 515 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 RFLNBQ8N5W9 214 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 OR1L1Q8NH94 360 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 CKLFQ9UBR5 152 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 A0A0B4J2E0 115 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 A0A1B0GX12 115 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 FCN1O00602 326 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 CDX4O14627 284 aaPredicted RBP7.59□□□□□ -1.19
USB1-216ENST00000624720 TM4SF5O14894 197 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 SNCGO76070 127 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 IGHV3-7P01780 117 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 SFTPDP35247 375 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 HES1Q14469 280 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 CDK5R1Q15078 307 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 ATP1A1-AS1Q5TC04 95 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 TSPO2Q5TGU0 170 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 Q6Q795 121 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 OR8B3Q8NGG8 313 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 C10orf35Q96D05 121 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 OR8B2Q96RD0 313 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 DEFB126Q9BYW3 111 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 RETNQ9HD89 108 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 DLL3Q9NYJ7 618 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 C21orf62Q9NYP8 219 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 PRR13Q9NZ81 148 aa7.59□□□□□ -1.19
USB1-216ENST00000624720 FAM90A26D6RGX4 464 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 TMEM262E9PQX1 116 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 NDUFA7O95182 113 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 MT-ND6P03923 174 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 IGLV3-21P80748 117 aaPredicted RBP7.58□□□□□ -1.2
USB1-216ENST00000624720 EWSR1Q01844 656 aaKnown RBP eCLIP7.58□□□□□ -1.2
USB1-216ENST00000624720 SLC38A11Q08AI6 406 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 DEFB124Q8NES8 71 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 RPS4Y2Q8TD47 263 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 Q96M85 177 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 RPRMQ9NS64 109 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 PSMB3P49720 205 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 EFNB2P52799 333 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 HERVK_113P63121 156 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 KIR3DL3Q8N743 410 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 ADAT3Q96EY9 351 aaPredicted RBP7.58□□□□□ -1.2
USB1-216ENST00000624720 ZNF665Q9H7R5 613 aa7.58□□□□□ -1.2
USB1-216ENST00000624720 FOXA2Q9Y261 457 aaPredicted RBP7.58□□□□□ -1.2
USB1-216ENST00000624720 FAM181BA6NEQ2 426 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 GYPAP02724 150 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 PLA2G5P39877 138 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 KIR2DS2P43631 304 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 ID3Q02535 119 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 SLC25A44Q96H78 314 aaPredicted RBP7.57□□□□□ -1.2
USB1-216ENST00000624720 AJUBAQ96IF1 538 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 PDCD1LG2Q9BQ51 273 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 FAM173AQ9BQD7 235 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 SPRY4Q9C004 299 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 AKAP13Q12802 2813 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 TPRP12270 2363 aaKnown RBP7.57□□□□□ -1.2
USB1-216ENST00000624720 RALGAPA1Q6GYQ0 2036 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 A0A087WV48 116 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 A0A1W2PNR3 127 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 H3BMG7 143 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 LYPD3O95274 346 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 TAL2Q16559 108 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 LINC00336Q6ZUF6 198 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 RNF144BQ7Z419 303 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 TSKUQ8WUA8 353 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 RNF166Q96A37 237 aaPredicted RBP7.57□□□□□ -1.2
USB1-216ENST00000624720 SLC25A39Q9BZJ4 359 aaPredicted RBP7.57□□□□□ -1.2
USB1-216ENST00000624720 EMC9Q9Y3B6 208 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 SPENQ96T58 3664 aaKnown RBP7.57□□□□□ -1.2
USB1-216ENST00000624720 A0A1W2PNU3 283 aaPredicted RBP7.57□□□□□ -1.2
USB1-216ENST00000624720 P04436 131 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 CD3EP07766 207 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 SMIM13P0DJ93 91 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 ZNF141Q15928 474 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 NMSQ5H8A3 153 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 STAC2Q6ZMT1 411 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 GTSF1Q8WW33 167 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 EMC6Q9BV81 110 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 ZNF292O60281 2723 aa7.57□□□□□ -1.2
USB1-216ENST00000624720 IGKV1D-42A0A075B6H8 117 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 FAM236DA0A1B0GTK5 79 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 FRG2CA6NGY1 282 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 ZNHIT1O43257 154 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 FAM236CP0DP71 79 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 CD59P13987 128 aa7.56□□□□□ -1.2
USB1-216ENST00000624720 CTXN1P60606 82 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms