RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 C15orf32Q32M92 178 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 WFDC3Q8IUB2 231 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 DYNAPQ8N1N2 210 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 RNASEH2CQ8TDP1 164 aaKnown RBP10□□□□□ -0.81
SCAMP1-207ENST00000621999 GINS3Q9BRX5 216 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 TMEM14BQ9NUH8 114 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 SEC11BP0C7V7 166 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 ATF4P18848 351 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 BLCAPP62952 87 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 UBE2L3P68036 154 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 PHYHIPLQ96FC7 376 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 CXorf58Q96LI9 332 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 UNKLQ9H9P5 680 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 SLC45A2Q9UMX9 530 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 DNASE2O00115 360 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 IL6RP08887 468 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 ST6GALNAC6Q969X2 333 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 FAM181BA6NEQ2 426 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 F6UZH7 168 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 M6PRP20645 277 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 CD69Q07108 199 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 OR1P1Q8NH06 330 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 HIGD1AQ9Y241 93 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 PUS1Q9Y606 427 aaKnown RBP eCLIP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 C11orf42Q8N5U0 333 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 DDB2Q92466 427 aa9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 GSX1Q9H4S2 264 aaPredicted RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 TECRQ9NZ01 308 aaKnown RBP9.99□□□□□ -0.81
SCAMP1-207ENST00000621999 ITPR3Q14573 2671 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 TRAV30A0A087WSZ9 112 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 CSN1S1P47710 185 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 SERF2P84101 59 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 FAM106AQ4KMX7 169 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 RABAC1Q9UI14 185 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 TMEM50AO95807 157 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 CLEC3BP05452 202 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 TFPI2P48307 235 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 HABP2Q14520 560 aaPredicted RBP9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 SOHLH1Q5JUK2 328 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 STPG3Q8N7X2 389 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 OR10J4P0C629 311 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 FHITP49789 147 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 LAMTOR1Q6IAA8 161 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 RPUSD4Q96CM3 377 aaKnown RBP9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 SMR3AQ99954 134 aa9.98□□□□□ -0.81
SCAMP1-207ENST00000621999 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 FCN3O75636 299 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 SPP1P10451 314 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 TIGITQ495A1 244 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 TMEM41BQ5BJD5 291 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 NPCDR1Q9BY65 106 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 NDUFA4L2Q9NRX3 87 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 VPREB3Q9UKI3 123 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 AVPP01185 164 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 BMI1P35226 326 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 WT1-ASQ06250 92 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 DYNLRB2Q8TF09 96 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 ARL3P36405 182 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 TMEM95Q3KNT9 176 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 LCNL1Q6ZST4 164 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 C15orf62A8K5M9 175 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 BMPR1BO00238 502 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 RNASE2P10153 161 aaKnown RBP9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 CYP2G1PQ6ZSU1 146 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 TMEM144Q7Z5S9 345 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 MBD6Q96DN6 1003 aa9.97□□□□□ -0.81
SCAMP1-207ENST00000621999 FLNAP21333 2647 aaKnown RBP9.96□□□□□ -0.81
SCAMP1-207ENST00000621999 VWC2LB2RUY7 222 aa9.96□□□□□ -0.81
SCAMP1-207ENST00000621999 H3BTX0 84 aa9.96□□□□□ -0.81
SCAMP1-207ENST00000621999 METTL26Q96S19 204 aa9.96□□□□□ -0.81
SCAMP1-207ENST00000621999 AAMDCQ9H7C9 122 aa9.96□□□□□ -0.81
SCAMP1-207ENST00000621999 TCRBV4S1A1TA0A5B7 111 aa9.96□□□□□ -0.81
SCAMP1-207ENST00000621999 ODF3BA8MYP8 253 aa9.96□□□□□ -0.82
SCAMP1-207ENST00000621999 PF4P02776 101 aa9.96□□□□□ -0.82
SCAMP1-207ENST00000621999 UBE2G1P62253 170 aa9.96□□□□□ -0.82
SCAMP1-207ENST00000621999 GGACTQ9BVM4 153 aa9.96□□□□□ -0.82
SCAMP1-207ENST00000621999 RNF24Q9Y225 148 aa9.96□□□□□ -0.82
SCAMP1-207ENST00000621999 MGST1P10620 155 aaKnown RBP9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 GPX4P36969 197 aaPredicted RBP9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 POU2AF1Q16633 256 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 TMEM14EPQ6UXP3 125 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 PUSL1Q8N0Z8 303 aaKnown RBP9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 OR5AU1Q8NGC0 362 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 OR51G1Q8NGK1 321 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 K7EQM0 130 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 FGF16O43320 207 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 HSPB1P04792 205 aaKnown RBP9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 ARL16Q0P5N6 197 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 TEX38Q6PEX7 206 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 RAB24Q969Q5 203 aa9.95□□□□□ -0.82
SCAMP1-207ENST00000621999 RNF2Q99496 336 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms