RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZNF436Q9C0F3 470 aaPredicted RBP10.91□□□□□ -0.66
CBWD3-217ENST00000621474 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
CBWD3-217ENST00000621474 IFNA10P01566 189 aa10.9□□□□□ -0.66
CBWD3-217ENST00000621474 IL15RAQ13261 267 aa10.9□□□□□ -0.66
CBWD3-217ENST00000621474 Q56UQ5 140 aa10.9□□□□□ -0.66
CBWD3-217ENST00000621474 C9orf66Q5T8R8 295 aa10.9□□□□□ -0.66
CBWD3-217ENST00000621474 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
CBWD3-217ENST00000621474 TXN2Q99757 166 aa10.9□□□□□ -0.66
CBWD3-217ENST00000621474 PRSS46E5RG02 174 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 LGALS9O00182 355 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 WRBO00258 174 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 SAP30O75446 220 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 MED6O75586 246 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 MBPP02686 304 aaPredicted RBP10.89□□□□□ -0.67
CBWD3-217ENST00000621474 CSN3P07498 182 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 MFAP4P55083 255 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 PAX9P55771 341 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 SPSB3Q6PJ21 355 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 OR4C12Q96R67 309 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
CBWD3-217ENST00000621474 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
CBWD3-217ENST00000621474 C7orf66A4D0T2 115 aa10.88□□□□□ -0.67
CBWD3-217ENST00000621474 A8MWP6 167 aa10.88□□□□□ -0.67
CBWD3-217ENST00000621474 PRB2P02812 416 aaPredicted RBP10.88□□□□□ -0.67
CBWD3-217ENST00000621474 DCTN2Q13561 401 aaKnown RBP10.88□□□□□ -0.67
CBWD3-217ENST00000621474 TATDN3Q17R31 274 aa10.88□□□□□ -0.67
CBWD3-217ENST00000621474 PRSS54Q6PEW0 395 aa10.88□□□□□ -0.67
CBWD3-217ENST00000621474 HAPLN4Q86UW8 402 aa10.88□□□□□ -0.67
CBWD3-217ENST00000621474 OR4X1Q8NH49 305 aa10.88□□□□□ -0.67
CBWD3-217ENST00000621474 TMEM213A2RRL7 107 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 FAM25EA8MYX2 175 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 H3BP45 60 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 SSSCA1O60232 199 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 INSL3P51460 131 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 CD69Q07108 199 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 CIB3Q96Q77 187 aaPredicted RBP10.87□□□□□ -0.67
CBWD3-217ENST00000621474 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 C5orf51A6NDU8 294 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 GNG7O60262 68 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 CLN5O75503 358 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 SIX6O95475 246 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 SCGB1D2O95969 90 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 ATP5IP56385 69 aaPredicted RBP10.87□□□□□ -0.67
CBWD3-217ENST00000621474 DEFA6Q01524 100 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 C2orf50Q96LR7 162 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 GPR61Q9BZJ8 451 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 C11orf1Q9H5F2 150 aa10.87□□□□□ -0.67
CBWD3-217ENST00000621474 GAR1Q9NY12 217 aaKnown RBP10.87□□□□□ -0.67
CBWD3-217ENST00000621474 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 PMS2P5A8MQ11 134 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 NDUFA4O00483 81 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 IGKV1-17P01599 117 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 IGLV1-51P01701 117 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 NPBWR1P48145 328 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 H2BFSP57053 126 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 SPANXN5Q5MJ07 72 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 GSG1LQ6UXU4 331 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 NOXA1Q86UR1 476 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 CACNG8Q8WXS5 425 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 WDR89Q96FK6 387 aaPredicted RBP10.86□□□□□ -0.67
CBWD3-217ENST00000621474 SMIM8Q96KF7 97 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 PEMTQ9UBM1 199 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 ALG5Q9Y673 324 aa10.86□□□□□ -0.67
CBWD3-217ENST00000621474 IGHV3OR16-8A0A075B7F1 116 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 RPS10-NUDT3A0A1W2PQS6 291 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 ZNF320A2RRD8 509 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 K7EPK0 472 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 GOSR2O14653 212 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 NUPL2O15504 423 aaKnown RBP10.85□□□□□ -0.67
CBWD3-217ENST00000621474 IFNA4P05014 189 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 IGLC1P0CG04 106 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 SLC25A4P12235 298 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 RND2P52198 227 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 OXA1LQ15070 435 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 TM4SF20Q53R12 229 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 ELOVL1Q9BW60 279 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 AURKAIP1Q9NWT8 199 aaPredicted RBP10.85□□□□□ -0.67
CBWD3-217ENST00000621474 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
CBWD3-217ENST00000621474 CCNKO75909 580 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 LY86O95711 162 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 FOLR2P14207 255 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 RAB32Q13637 225 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 GAMTQ14353 236 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 RGS21Q2M5E4 152 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 TMEM14EPQ6UXP3 125 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 NPIPB3Q92617 1050 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 RAB40CQ96S21 281 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 CBLN1P23435 193 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 TAS2R30P59541 319 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 RAB11AP62491 216 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 RELQ04864 619 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-217ENST00000621474 ETFRF1Q6IPR1 90 aa10.84□□□□□ -0.67
CBWD3-217ENST00000621474 PAIP2BQ9ULR5 123 aaKnown RBP10.84□□□□□ -0.67
CBWD3-217ENST00000621474 STRAPQ9Y3F4 350 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms