RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CRYBB3P26998 211 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 ATP5G2Q06055 141 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF672Q499Z4 452 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 PRR31Q5SQ13 230 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 Q9UFV3 132 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 BCL2P10415 239 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 VAMP3Q15836 100 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 DEFB121Q5J5C9 76 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 H1FOOQ8IZA3 346 aaPredicted RBP6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 OR10J6PQ8NGY7 276 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
PTPDC1-204ENST00000620992 CHD3Q12873 2000 aaKnown RBP6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 CRISP2P16562 243 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 TNFRSF9Q07011 255 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 SCGB1D4Q6XE38 83 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 Q6ZS49 121 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 ZBTB34Q8NCN2 500 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 RCC1LQ96I51 464 aaKnown RBP6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 LINC00470Q9BZP3 86 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 NPIPB11E5RHQ5 1161 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BKO60814 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 CA2P00918 260 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BJP06899 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 GPX1P07203 203 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 BTF3P20290 206 aaKnown RBP6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HOXA5P20719 270 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BOP23527 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 LMO1P25800 156 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BBP33778 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 PLA2G5P39877 138 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 CDX1P47902 265 aaPredicted RBP6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BDP58876 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BCP62807 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 TWIST1Q15672 202 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST2H2BEQ16778 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF502Q8TBZ5 544 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BHQ93079 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BNQ99877 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H2BMQ99879 126 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 OR2T8A6NH00 312 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF729A6NN14 1252 aaPredicted RBP6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 PQLC2Q6ZP29 291 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF525Q8N782 197 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF383Q8NA42 475 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 Q8NFD4 153 aa6.86□□□□□ -1.31
PTPDC1-204ENST00000620992 M0R381 172 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 IGKV1-39P01597 117 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 IGKV1-5P01602 117 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 IGKV1D-39P04432 117 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H1EP10412 219 aaKnown RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 ID1P41134 155 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 NRN1LQ496H8 165 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 C2orf83Q53S99 150 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 DCAF16Q9NXF7 216 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 CTXND1A0A1B0GTU2 59 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 RNF223E7ERA6 249 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 TRGC1P0CF51 173 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 COX5BP10606 129 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 HNRNPA3P51991 378 aaKnown RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 TAF15Q92804 592 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 METRNQ9UJH8 293 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 TIMM23O14925 209 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 IGHV1-46P01743 117 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 CD55P08174 381 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 WDR82Q6UXN9 313 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 SRSF12Q8WXF0 261 aaKnown RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNRD1Q9P1U0 126 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 RNF24Q9Y225 148 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 A0A087WWC5 75 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 FBLL1A6NHQ2 334 aaKnown RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 H7C2G1 150 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 IL18BPO95998 194 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 SRSF7Q16629 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM53AQ6NSI3 398 aaPredicted RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 DPPA3Q6W0C5 159 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A1Q86YD7 464 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM186Q96B77 213 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 BPESC1Q9GZL8 116 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 ZNF430Q9H8G1 570 aaPredicted RBP6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 DNAJC4Q9NNZ3 241 aa6.85□□□□□ -1.31
PTPDC1-204ENST00000620992 GRIFINA4D1Z8 144 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 TMEM262E9PQX1 116 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 K7EM74 188 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 THBDP07204 575 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 PGA5P0DJD9 388 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 ARL14EPLP0DKL9 152 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 FOXA3P55318 350 aaPredicted RBP6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 FAM90A2PQ658T7 463 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 LINC00596Q86U02 117 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 PGLYRP4Q96LB8 373 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 TBX15Q96SF7 602 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 JPT1Q9UK76 154 aa6.84□□□□□ -1.31
PTPDC1-204ENST00000620992 MRPS18CQ9Y3D5 142 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms