RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 AP3S2P59780 193 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 KLF9Q13886 244 aaPredicted RBP12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 ZNF600Q6ZNG1 722 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 GGTLC1Q9BX51 225 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 CACNG5Q9UF02 275 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 V9GYH0 126 aa12.21□□□□□ -0.45
AP001059.3-201ENST00000619053 LOC102724200A0A096LPH7 203 aaPredicted RBP12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 PIGBOS1A0A0B4J2F0 54 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 OR4C46A6NHA9 309 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 YIF1AO95070 293 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 PYDC2Q56P42 97 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 OR4X1Q8NH49 305 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 RHPN1-AS1Q9BWJ2 59 aa12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
AP001059.3-201ENST00000619053 TENM2Q9NT68 2774 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 CLN5O75503 358 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 CD5P06127 495 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 SULT1A3P0DMM9 295 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 SULT1A4P0DMN0 295 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 BMI1P35226 326 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 SRPXP78539 464 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 ZNF79Q15937 498 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 TOMM20LQ6UXN7 152 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 CCDC190Q86UF4 302 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 TOMM5Q8N4H5 51 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 RNF2Q99496 336 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 HEYLQ9NQ87 328 aaPredicted RBP12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
AP001059.3-201ENST00000619053 RPS10-NUDT3A0A1W2PQS6 291 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 SCGB2A1O75556 95 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 ANXA3P12429 323 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 OPRK1P41145 380 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 RNASEH2CQ8TDP1 164 aaKnown RBP12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 VSIRQ9H7M9 311 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 RETNQ9HD89 108 aa12.18□□□□□ -0.46
AP001059.3-201ENST00000619053 TRAV30A0A087WSZ9 112 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 CEBPZOSA8MTT3 80 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 AKR1C4P17516 323 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 CCR6P51684 374 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 NOXA1Q86UR1 476 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 LGI3Q8N145 548 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 SLC25A21Q9BQT8 299 aaPredicted RBP12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 MRPL36Q9P0J6 103 aaKnown RBP12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 PUS1Q9Y606 427 aaKnown RBP eCLIP12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 CSMD3Q7Z407 3707 aa12.17□□□□□ -0.46
AP001059.3-201ENST00000619053 DUXBA0A1W2PPF3 345 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 SLC25A4P12235 298 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 SMCO1Q147U7 214 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 MLANAQ16655 118 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 TMEM128Q5BJH2 165 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 SLC24A4Q8NFF2 622 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 HSPB7Q9UBY9 170 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 UBQLN2Q9UHD9 624 aa12.16□□□□□ -0.46
AP001059.3-201ENST00000619053 IGHV3-49A0A0A0MS15 119 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 A0A1B0GU03 582 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 APOC4P55056 127 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 LYZL2Q7Z4W2 148 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
AP001059.3-201ENST00000619053 TRAV2A0A0B4J234 112 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 UBE2CO00762 179 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 NPY1RP25929 384 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 ATP5IP56385 69 aaPredicted RBP12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 PAFAH1B2P68402 229 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 ETFRF1Q6IPR1 90 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 Q6ZWC4 215 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 TCF24Q7RTU0 167 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 ST8SIA2Q92186 375 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 OVOL2Q9BRP0 275 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 U3KQ87 197 aa12.14□□□□□ -0.47
AP001059.3-201ENST00000619053 A0A1W2PS18 150 aa12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 NPPCP23582 126 aa12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 CRYBB3P26998 211 aa12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 YPEL3P61236 119 aaPredicted RBP12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 TMED4Q7Z7H5 227 aa12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
AP001059.3-201ENST00000619053 OR1S2Q8NGQ3 325 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms