RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 RNASEH2CQ8TDP1 164 aaKnown RBP6.23□□□□□ -1.41
NEK3-209ENST00000618856 MITD1Q8WV92 249 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 MISP3Q96FF7 219 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 MRPL36Q9P0J6 103 aaKnown RBP6.23□□□□□ -1.41
NEK3-209ENST00000618856 MRPL27Q9P0M9 148 aaKnown RBP6.23□□□□□ -1.41
NEK3-209ENST00000618856 UFC1Q9Y3C8 167 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 IGHV3-21A0A0B4J1V1 117 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 IZUMO1RA6ND01 250 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 C15orf62A8K5M9 175 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 CLN5O75503 358 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 UPK1BO75841 260 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 TMEM50AO95807 157 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 TCRBP04435 133 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 ANXA7P20073 488 aaKnown RBP6.22□□□□□ -1.41
NEK3-209ENST00000618856 NPBWR1P48145 328 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 ID3Q02535 119 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 ZNF846Q147U1 533 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 CD300EQ496F6 205 aaPredicted RBP6.22□□□□□ -1.41
NEK3-209ENST00000618856 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 GGNBP1Q5YKI7 109 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 C11orf87Q6NUJ2 197 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 TMEM116Q8NCL8 245 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 SLC24A4Q8NFF2 622 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 DTD1Q8TEA8 209 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 WDR12Q9GZL7 423 aaKnown RBP6.22□□□□□ -1.41
NEK3-209ENST00000618856 C20orf85Q9H1P6 137 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 RBKSQ9H477 322 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 PALMDQ9NP74 551 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 HEYLQ9NQ87 328 aaPredicted RBP6.22□□□□□ -1.41
NEK3-209ENST00000618856 DAZ1Q9NQZ3 744 aaKnown RBP6.22□□□□□ -1.41
NEK3-209ENST00000618856 C19orf73Q9NVV2 129 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 MLXQ9UH92 298 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 U3KQ87 197 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 STAB2Q8WWQ8 2551 aa6.22□□□□□ -1.41
NEK3-209ENST00000618856 TRAV25A0A0B4J276 109 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 IGKV1-17P01599 117 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 RELQ04864 619 aaPredicted RBP6.21□□□□□ -1.42
NEK3-209ENST00000618856 MLANAQ16655 118 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 Q56UQ5 140 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 LCN12Q6JVE5 192 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 PRSS54Q6PEW0 395 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 UXS1Q8NBZ7 420 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 DUSP18Q8NEJ0 188 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 OR4D5Q8NGN0 318 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 CACNG8Q8WXS5 425 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 HIPK2Q9H2X6 1198 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 ZFAND3Q9H8U3 227 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 ENY2Q9NPA8 101 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 SMAD5-AS1Q9Y6J3 95 aa6.21□□□□□ -1.42
NEK3-209ENST00000618856 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 IGHV3-35A0A0C4DH35 117 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 ZNF320A2RRD8 509 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 CEBPZOSA8MTT3 80 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 MPTX1A8MV57 137 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 NUPL2O15504 423 aaKnown RBP6.2□□□□□ -1.42
NEK3-209ENST00000618856 GNG7O60262 68 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 ADAP1O75689 374 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
NEK3-209ENST00000618856 LY86O95711 162 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 IGHV3-48P01763 117 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 HOXB5P09067 269 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 IGLC1P0CG04 106 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 SLC25A4P12235 298 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 NPY1RP25929 384 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 GPX4P36969 197 aaPredicted RBP6.2□□□□□ -1.42
NEK3-209ENST00000618856 CD69Q07108 199 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 DEFB121Q5J5C9 76 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 TOMM20LQ6UXN7 152 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 LINC00322Q6ZN03 302 aaPredicted RBP6.2□□□□□ -1.42
NEK3-209ENST00000618856 NOXA1Q86UR1 476 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 UBAC2Q8NBM4 344 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 OR1S1Q8NH92 325 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 COQ8AQ8NI60 647 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 PINX1Q96BK5 328 aaKnown RBP6.2□□□□□ -1.42
NEK3-209ENST00000618856 SMPXQ9UHP9 88 aa6.2□□□□□ -1.42
NEK3-209ENST00000618856 TRAV30A0A087WSZ9 112 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 IGHV7-4-1A0A0J9YVY3 117 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 RPS10-NUDT3A0A1W2PQS6 291 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 TSPAN4O14817 238 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 SYNGR2O43760 224 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 MED6O75586 246 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 NXPH3O95157 252 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 IL5P05113 134 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
NEK3-209ENST00000618856 OPRK1P41145 380 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 YPEL3P61236 119 aaPredicted RBP6.19□□□□□ -1.42
NEK3-209ENST00000618856 C4orf46Q504U0 113 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 FAM90A2PQ658T7 463 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 ETFRF1Q6IPR1 90 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 ZNF600Q6ZNG1 722 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 OR52B4Q8NGK2 314 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 ZNF431Q8TF32 576 aaPredicted RBP6.19□□□□□ -1.42
NEK3-209ENST00000618856 WDR89Q96FK6 387 aaPredicted RBP6.19□□□□□ -1.42
NEK3-209ENST00000618856 VSIRQ9H7M9 311 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 NUDT15Q9NV35 164 aa6.19□□□□□ -1.42
NEK3-209ENST00000618856 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
NEK3-209ENST00000618856 IGKV1D-37A0A075B6S9 117 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms