RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 NECAP1Q8NC96 275 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 STXBP6Q8NFX7 210 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 UBE2E2Q96LR5 201 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 UHRF2Q96PU4 802 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 NDUFA4L2Q9NRX3 87 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 GAR1Q9NY12 217 aaKnown RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 THYN1Q9P016 225 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 ANAPC10Q9UM13 185 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 A0A1B0GV50 99 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 FAM24AA6NFZ4 105 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 I3L521 148 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 IGLV1-40P01703 118 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 APOHP02749 345 aaPredicted RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 IL4P05112 153 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 OR8U8P0C7N1 319 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 RPL35AP18077 110 aaKnown RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 KRTAP10-11P60412 298 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 RAB32Q13637 225 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 CD300EQ496F6 205 aaPredicted RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 TUBA4BQ9H853 241 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 TMEM14BQ9NUH8 114 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 COMMD9Q9P000 198 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 MGAT4CQ9UBM8 478 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 F11RQ9Y624 299 aaKnown RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 A0A0B4J2A0 478 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 HMGB3O15347 200 aaKnown RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 DFFBO76075 338 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 OR5G3P0C626 314 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 FOLR2P14207 255 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 SLC6A1P30531 599 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 UCP3P55916 312 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 PRCDQ00LT1 54 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 IFITM2Q01629 132 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 CD69Q07108 199 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 RBPMS2Q6ZRY4 209 aaKnown RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 SLC25A42Q86VD7 318 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 APRG1Q8IVJ8 170 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 IQCF2Q8IXL9 164 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 C4orf3Q8WVX3 66 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 PSENENQ9NZ42 101 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 SHPKQ9UHJ6 478 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 RCL1Q9Y2P8 373 aaKnown RBP3.53□□□□□ -1.84
SYCP1-210ENST00000618516 RFNGQ9Y644 331 aa3.53□□□□□ -1.84
SYCP1-210ENST00000618516 IGHV3OR16-12A0A075B7B8 117 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 RBFOX2O43251 390 aaKnown RBP eCLIP3.53□□□□□ -1.85
SYCP1-210ENST00000618516 SYNGR2O43760 224 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 ATG12O94817 140 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 HTN1P15515 57 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 CXCL3P19876 107 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 ADMP35318 185 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 DHODHQ02127 395 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 KIAA0141Q14154 515 aaPredicted RBP3.53□□□□□ -1.85
SYCP1-210ENST00000618516 PRR31Q5SQ13 230 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 TMEM61Q8N0U2 210 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 LILRB2Q8N423 598 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 OR9G4Q8NGQ1 327 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 LINC00052Q96N35 136 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 RNF5Q99942 180 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 RETNQ9HD89 108 aa3.53□□□□□ -1.85
SYCP1-210ENST00000618516 FXYD6-FXYD2A0A087WZ82 144 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 UBE2L5PA0A1B0GUS4 154 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 C7orf66A4D0T2 115 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 K7EIM0 57 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 DNASE2O00115 360 aaPredicted RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 DEFB4AO15263 64 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 TPPPO94811 219 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 TMEM50AO95807 157 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 IL5P05113 134 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 CD81P60033 236 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 CFHR3Q02985 330 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 FAM106AQ4KMX7 169 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 PRSS54Q6PEW0 395 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 DEFB125Q8N687 156 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 OR1B1Q8NGR6 318 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 OR4A5Q8NH83 315 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 GLMPQ8WWB7 406 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 RNF2Q99496 336 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 MED9Q9NWA0 146 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 FKBP11Q9NYL4 201 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF257Q9Y2Q1 563 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 ALG5Q9Y673 324 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 IGLV11-55A0A075B6I3 123 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 TGOLN2O43493 480 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 GGCTO75223 188 aaKnown RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 MBPP02686 304 aaPredicted RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF688P0C7X2 276 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF705DP0CH99 300 aaPredicted RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF705BP0CI00 300 aaPredicted RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 GP9P14770 177 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 ZP3P21754 424 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 OR10J1P30954 320 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 FCGR2BP31994 310 aaPredicted RBP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 SUB1P53999 127 aaKnown RBP eCLIP3.52□□□□□ -1.85
SYCP1-210ENST00000618516 FXYD7P58549 80 aa3.52□□□□□ -1.85
SYCP1-210ENST00000618516 SPCS3P61009 180 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms