RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 YIF1AO95070 293 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 SCAF4O95104 1147 aaKnown RBP12.03□□□□□ -0.48
BRCA1-228ENST00000618469 CD7P09564 240 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 C8orf88P0DMB2 117 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 HTR2BP41595 481 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 NPBWR1P48145 328 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 SMCO1Q147U7 214 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 PVRIGQ6DKI7 326 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 ZFAND6Q6FIF0 208 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 DUSP18Q8NEJ0 188 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 NEURL2Q9BR09 285 aa12.03□□□□□ -0.48
BRCA1-228ENST00000618469 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 LCE6AA0A183 80 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 DUXBA0A1W2PPF3 345 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 IL7P13232 177 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 ZNF414Q96IQ9 312 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 WFDC10AQ9H1F0 79 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-228ENST00000618469 TUBA4BQ9H853 241 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 C19orf73Q9NVV2 129 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 CACFD1Q9UGQ2 172 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 DNAH7Q8WXX0 4024 aa12.02□□□□□ -0.49
BRCA1-228ENST00000618469 C15orf62A8K5M9 175 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 A8MZ25 164 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 NDUFB6O95139 128 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 SFT2D2O95562 160 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 RBPMS2Q6ZRY4 209 aaKnown RBP12.01□□□□□ -0.49
BRCA1-228ENST00000618469 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 OR1S1Q8NH92 325 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 HIPK2Q9H2X6 1198 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
BRCA1-228ENST00000618469 HSPB7Q9UBY9 170 aa12.01□□□□□ -0.49
BRCA1-228ENST00000618469 CENPXA8MT69 81 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 LYL1P12980 280 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 NPY1RP25929 384 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 BTCP35070 178 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 C2orf83Q53S99 150 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 OR52B4Q8NGK2 314 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 DTD1Q8TEA8 209 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
BRCA1-228ENST00000618469 RBKSQ9H477 322 aa12□□□□□ -0.49
BRCA1-228ENST00000618469 IGHV3-49A0A0A0MS15 119 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 TRAV25A0A0B4J276 109 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 A0A1B0GU03 582 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 RPS10-NUDT3A0A1W2PQS6 291 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 K7EMT4 169 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 SCGB2A1O75556 95 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 UBE2MP61081 183 aaKnown RBP11.99□□□□□ -0.49
BRCA1-228ENST00000618469 ZNF600Q6ZNG1 722 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 LRTM2Q8N967 370 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 RCHY1Q96PM5 261 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
BRCA1-228ENST00000618469 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 OR11H12B2RN74 326 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 CLN5O75503 358 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 IFNA10P01566 189 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 MLANAQ16655 118 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 OR4X1Q8NH49 305 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 RNASEH2CQ8TDP1 164 aaKnown RBP11.98□□□□□ -0.49
BRCA1-228ENST00000618469 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 LYSTQ99698 3801 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 SPAG8Q99932 426 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-228ENST00000618469 GINS3Q9BRX5 216 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
BRCA1-228ENST00000618469 PUS1Q9Y606 427 aaKnown RBP eCLIP11.98□□□□□ -0.49
BRCA1-228ENST00000618469 IGHV3OR16-13A0A075B7E8 117 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 IGHV3-74A0A0B4J1X5 117 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 TMEM50AO95807 157 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 HOXB5P09067 269 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 RND2P52198 227 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 LAMTOR1Q6IAA8 161 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 TOMM20LQ6UXN7 152 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 NOXA1Q86UR1 476 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 TMEM116Q8NCL8 245 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 TM2D3Q9BRN9 247 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 RHPN1-AS1Q9BWJ2 59 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 ZFAND3Q9H8U3 227 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 SMPXQ9UHP9 88 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 TMED3Q9Y3Q3 217 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 DNAH1Q9P2D7 4330 aa11.97□□□□□ -0.49
BRCA1-228ENST00000618469 TRAV14DV4A0A0A6YYC5 116 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 C9orf170A2RU37 121 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 CHEK1O14757 476 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 TSPAN4O14817 238 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 LYRM1O43325 122 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 PITX3O75364 302 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 IAPPP10997 89 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 SLC25A4P12235 298 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 SLC25A6P12236 298 aa11.96□□□□□ -0.49
BRCA1-228ENST00000618469 ANXA7P20073 488 aaKnown RBP11.96□□□□□ -0.49
BRCA1-228ENST00000618469 DHRS2Q13268 280 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms