RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FAM210BQ96KR6 192 aa10□□□□□ -0.81
CIITA-212ENST00000618207 FNDC4Q9H6D8 234 aaPredicted RBP10□□□□□ -0.81
CIITA-212ENST00000618207 CFAP46Q8IYW2 2715 aa10□□□□□ -0.81
CIITA-212ENST00000618207 CXorf1O96002 111 aa10□□□□□ -0.81
CIITA-212ENST00000618207 LINC00869P0C866 280 aa10□□□□□ -0.81
CIITA-212ENST00000618207 RHOBP62745 196 aa10□□□□□ -0.81
CIITA-212ENST00000618207 PSG5Q15238 335 aa10□□□□□ -0.81
CIITA-212ENST00000618207 HLA-DRB5Q30154 266 aa10□□□□□ -0.81
CIITA-212ENST00000618207 NPIPB3Q92617 1050 aa10□□□□□ -0.81
CIITA-212ENST00000618207 RPEQ96AT9 228 aa10□□□□□ -0.81
CIITA-212ENST00000618207 UHRF2Q96PU4 802 aa10□□□□□ -0.81
CIITA-212ENST00000618207 CLEC7AQ9BXN2 247 aa10□□□□□ -0.81
CIITA-212ENST00000618207 MRPL36Q9P0J6 103 aaKnown RBP10□□□□□ -0.81
CIITA-212ENST00000618207 A0A1W2PPI3 338 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 IL3RAP26951 378 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 GCHFRP30047 84 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 RPL29P47914 159 aaKnown RBP9.99□□□□□ -0.81
CIITA-212ENST00000618207 CD69Q07108 199 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 PLGLAQ15195 96 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 C2orf83Q53S99 150 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 RUSC1-AS1Q66K80 236 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 TMEM144Q7Z5S9 345 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 VSTM2AQ8TAG5 236 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 TMEM167AQ8TBQ9 72 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 FBXL15Q9H469 300 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 RPH3ALQ9UNE2 315 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 FLNCQ14315 2725 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 TRAV5A0A0B4J249 113 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 A0A1W2PPQ1 181 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 B4DEV8 164 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 AREGP15514 252 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 CDKN1BP46527 198 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 PRRX1P54821 245 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 ZNF90Q03938 601 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 LINC00311Q8N616 119 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 GSX1Q9H4S2 264 aaPredicted RBP9.99□□□□□ -0.81
CIITA-212ENST00000618207 UBTD1Q9HAC8 227 aa9.99□□□□□ -0.81
CIITA-212ENST00000618207 CRYBG3Q68DQ2 2970 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 H7BYZ3 331 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 PRR20EP86478 221 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 PRR20CP86479 221 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 PRR20DP86480 221 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 PRR20BP86481 221 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 PRR20AP86496 221 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 LDLRAD2Q5SZI1 272 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 BEND2Q8NDZ0 799 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 RAB1CQ92928 201 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 SLC35E1Q96K37 410 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 CBLN4Q9NTU7 201 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 SLC45A2Q9UMX9 530 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 VPS13CQ709C8 3753 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 MOSP00540 346 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 IGLV1-47P01700 117 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 S100A2P29034 98 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 FAM3BP58499 235 aaPredicted RBP9.98□□□□□ -0.81
CIITA-212ENST00000618207 PRO1933Q9H354 126 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 MYO18BQ8IUG5 2567 aa9.98□□□□□ -0.81
CIITA-212ENST00000618207 TRBV20OR9-2A0A075B6H5 130 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 DLL1O00548 723 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 FCN1O00602 326 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 GNLYP22749 145 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 MC5RP33032 325 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 GALR1P47211 349 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 TIMD4Q96H15 378 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 NDUFAF3Q9BU61 184 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 M0QZK8 103 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 RND2P52198 227 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 C1orf122Q6ZSJ8 110 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
CIITA-212ENST00000618207 PMS2P11Q13670 270 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 PCGF1Q9BSM1 259 aa9.97□□□□□ -0.81
CIITA-212ENST00000618207 ZFHX3Q15911 3703 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 A0A1W2PN81 502 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 LIPFP07098 398 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 OR5G3P0C626 314 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 RPL27AP46776 148 aaKnown RBP9.96□□□□□ -0.81
CIITA-212ENST00000618207 HES1Q14469 280 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 ZNF596Q8TC21 504 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 FRZBQ92765 325 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 TNFRSF14Q92956 283 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 OR5B12Q96R08 314 aa9.96□□□□□ -0.81
CIITA-212ENST00000618207 FAM103A1Q9BTL3 118 aaKnown RBP9.96□□□□□ -0.81
CIITA-212ENST00000618207 IGSF10Q6WRI0 2623 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 TIMM23O14925 209 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 EREGO14944 169 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 PDE6DO43924 150 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 MRGPRG-AS1Q2M3A8 158 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 MALSU1Q96EH3 234 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 SLC25A33Q9BSK2 321 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
CIITA-212ENST00000618207 C19orf84I3L1E1 186 aa9.95□□□□□ -0.82
CIITA-212ENST00000618207 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms