RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 OR10G4Q8NGN3 311 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 OR10G9Q8NGN4 311 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 OR10G7Q8NGN6 311 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 OR5R1Q8NH85 324 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 TMEM170AQ8WVE7 144 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 AJUBAQ96IF1 538 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 C19orf24Q9BVV8 132 aa13.32□□□□□ -0.28
TRAPPC3-210ENST00000617904 MFSD2BA6NFX1 497 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 E7EUB6 86 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 I3L521 148 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 AGPAT2O15120 278 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 TAGLN2P37802 199 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 PPT1P50897 306 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 ARSJQ5FYB0 599 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 S100A7AQ86SG5 101 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 SFT2D1Q8WV19 159 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 ACY3Q96HD9 319 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 RNF2Q99496 336 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 WNT10AQ9GZT5 417 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 PXMP4Q9Y6I8 212 aa13.31□□□□□ -0.28
TRAPPC3-210ENST00000617904 ZFP92A6NM28 416 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 REG1AP05451 166 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 AREGP15514 252 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 CTRB1P17538 263 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 HNF1AP20823 631 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 PAX6P26367 422 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 GAMTQ14353 236 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 PVRIGQ6DKI7 326 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 CTRB2Q6GPI1 263 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 TTC9CQ8N5M4 171 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 LSM4Q9Y4Z0 139 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-210ENST00000617904 ARHGAP32A7KAX9 2087 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 TRAV30A0A087WSZ9 112 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 TRAV1-1A0A0B4J248 108 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 CTXND1A0A1B0GTU2 59 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 H3BUX3 64 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 CRYGCP07315 174 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 B2MP61769 119 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 KLF17Q5JT82 389 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 C9orf139Q6ZV77 190 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 C5orf56Q8N8D9 126 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 SGMS2Q8NHU3 365 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 LYPD6BQ8NI32 183 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 TREM1Q9NP99 234 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 RPRMQ9NS64 109 aa13.29□□□□□ -0.28
TRAPPC3-210ENST00000617904 NPBWR1P48145 328 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 RHOBP62745 196 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 ACSM6Q6P461 480 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 UNQ5815/PRO19632Q6UWF5 114 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 RBMS3Q6XE24 437 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 OR1L4Q8NGR5 311 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 MBD3L1Q8WWY6 194 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 NARS2Q96I59 477 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 PFDN5Q99471 154 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 MGST2Q99735 147 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 EIF5A2Q9GZV4 153 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 GAR1Q9NY12 217 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 ANK2Q01484 3957 aa13.28□□□□□ -0.28
TRAPPC3-210ENST00000617904 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 A0A1B0GW64 132 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 OR10J1P30954 320 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 S100A7P31151 101 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 RND2P52198 227 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 FAM122CQ6P4D5 195 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 TMEM116Q8NCL8 245 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 FAM110DQ8TAY7 271 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 NPIPB3Q92617 1050 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
TRAPPC3-210ENST00000617904 TCRBV4S1A1TA0A5B7 111 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 A6NDX4 124 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 APELAP0DMC3 54 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 TAS2R45P59539 299 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 C9orf152Q5JTZ5 239 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 THAP8Q8NA92 274 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 FAM210AQ96ND0 272 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 TRGV9Q99603 122 aa13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 TET2Q6N021 2002 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC3-210ENST00000617904 AVPP01185 164 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 SRP14P37108 136 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 FHITP49789 147 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 MFAP4P55083 255 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 GUK1Q16774 197 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 OR2T6Q8NHC8 308 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 FAM103A1Q9BTL3 118 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 TNFRSF19Q9NS68 423 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 SLC45A2Q9UMX9 530 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 RNF24Q9Y225 148 aa13.25□□□□□ -0.29
TRAPPC3-210ENST00000617904 SEC14L6B5MCN3 397 aa13.24□□□□□ -0.29
TRAPPC3-210ENST00000617904 ZP3P21754 424 aa13.24□□□□□ -0.29
TRAPPC3-210ENST00000617904 PSMB3P49720 205 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms