RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 FAM223AQ8IWN6 122 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 C22orf15Q8WYQ4 148 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 TRGV9Q99603 122 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 FGF7P21781 194 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 BTNL8Q6UX41 500 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 NECAP1Q8NC96 275 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 RNF141Q8WVD5 230 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 MGST2Q99735 147 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 BAHCC1Q9P281 2608 aa9.19□□□□□ -0.94
PDPN-211ENST00000617617 MT-CO2P00403 227 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 RAB31Q13636 194 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 RNF152Q8N8N0 203 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 SMR3AQ99954 134 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 MED9Q9NWA0 146 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PLA2G2EQ9NZK7 142 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 MBP02144 154 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 DEFA4P12838 97 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PRR20EP86478 221 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PRR20CP86479 221 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PRR20DP86480 221 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PRR20BP86481 221 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PRR20AP86496 221 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 FAM209BQ5JX69 171 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 SLC25A24Q6NUK1 477 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 GGTLC1Q9BX51 225 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 C16orf95Q9H693 158 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 SLC45A2Q9UMX9 530 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 IGKV1D-37A0A075B6S9 117 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 TRAV30A0A087WSZ9 112 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 ANKRD34BA5PLL1 514 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 IGHG4P01861 327 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 SELENOTP62341 195 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 PXDC1Q5TGL8 231 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 ALKAL2Q6UX46 152 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 LYPD6BQ8NI32 183 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 ZNF418Q8TF45 676 aaPredicted RBP9.18□□□□□ -0.94
PDPN-211ENST00000617617 MISP3Q96FF7 219 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 CXorf58Q96LI9 332 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 ESM1Q9NQ30 184 aa9.18□□□□□ -0.94
PDPN-211ENST00000617617 GAR1Q9NY12 217 aaKnown RBP9.18□□□□□ -0.94
PDPN-211ENST00000617617 HSD17B11Q8NBQ5 300 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 MYOZ3Q8TDC0 251 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 TMED6Q8WW62 240 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 USMG5Q96IX5 58 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 SH3BGRL3Q9H299 93 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 IGKV1OR2-108A0A075B7D4 117 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 TCRBV4S1A1TA0A5B7 111 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 CLN5O75503 358 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
PDPN-211ENST00000617617 TRBV7-1A0A0A6YYK4 115 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 SH2D7A6NKC9 451 aaPredicted RBP9.16□□□□□ -0.94
PDPN-211ENST00000617617 G3V318 75 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 AGPAT2O15120 278 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 NDUFA7O95182 113 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 PLP1P60201 277 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 AKR1C1Q04828 323 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 ECSCRQ19T08 205 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 Q6ZS46 218 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 COMMD1Q8N668 190 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 ZNF709Q8N972 641 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 OR2T6Q8NHC8 308 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 MRPL36Q9P0J6 103 aaKnown RBP9.16□□□□□ -0.94
PDPN-211ENST00000617617 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
PDPN-211ENST00000617617 CRLF1O75462 422 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 NMBP08949 121 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 MFAP4P55083 255 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 RUNX1Q01196 453 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 MLANAQ16655 118 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 TMEM41BQ5BJD5 291 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 C19orf35Q6ZS72 473 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 OR5T1Q8NG75 326 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 ZNF502Q8TBZ5 544 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 WIPF2Q8TF74 440 aaPredicted RBP9.16□□□□□ -0.94
PDPN-211ENST00000617617 RSG1Q9BU20 258 aa9.16□□□□□ -0.94
PDPN-211ENST00000617617 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 SEC14L6B5MCN3 397 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 NDUFB8O95169 186 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 LINC00869P0C866 280 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 IGLC1P0CG04 106 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 APELAP0DMC3 54 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 PSMB8P28062 276 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 CAMLGP49069 296 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 YPEL3P61236 119 aaPredicted RBP9.15□□□□□ -0.94
PDPN-211ENST00000617617 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 CYP2G1PQ6ZSU1 146 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 FBXL7Q9UJT9 491 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 LINC00862A6NCI5 91 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 FABP1P07148 127 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 NPBWR1P48145 328 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 FOXE3Q13461 319 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 NPIPB3Q92617 1050 aa9.15□□□□□ -0.94
PDPN-211ENST00000617617 SMCO3A2RU48 225 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 NUDT19A8MXV4 375 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 SCGB2A1O75556 95 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 ELANEP08246 267 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 RND2P52198 227 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 RAB14P61106 215 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 WFDC12Q8WWY7 111 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms