RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 EXOSC2Q13868 293 aaKnown RBP11.46□□□□□ -0.57
UBXN1-218ENST00000616865 C15orf32Q32M92 178 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 RNF152Q8N8N0 203 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 OR2T35Q8NGX2 323 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 RNASEH2CQ8TDP1 164 aaKnown RBP11.46□□□□□ -0.57
UBXN1-218ENST00000616865 EEF1AKMT3Q96AZ1 226 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 CXorf58Q96LI9 332 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.58
UBXN1-218ENST00000616865 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 A0A1B0GVG6 124 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 CCL24O00175 119 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 CCNKO75909 580 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 IGHV3-11P01762 117 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
UBXN1-218ENST00000616865 MFAP2P55001 183 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 ETFRF1Q6IPR1 90 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 ZNF491Q8N8L2 437 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 DCUN1D4Q92564 292 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 UBE2E2Q96LR5 201 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 OR5B12Q96R08 314 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 OR4C12Q96R67 309 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 PRR25Q96S07 402 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 ZC4H2Q9NQZ6 224 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 OR5AC2Q9NZP5 309 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
UBXN1-218ENST00000616865 C15orf62A8K5M9 175 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 C3orf84H3BNL1 204 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
UBXN1-218ENST00000616865 TMEM50AO95807 157 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 MT-CO2P00403 227 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 METTL15P1P0C7V9 234 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
UBXN1-218ENST00000616865 PAX9P55771 341 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 DEFB136Q30KP8 78 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 C9orf66Q5T8R8 295 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 OR8G2PQ6IF36 304 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 AKAP14Q86UN6 197 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 STX12Q86Y82 276 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 CHAC2Q8WUX2 184 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 MBD2Q9UBB5 411 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 DMRT1Q9Y5R6 373 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 S4R3C0 116 aa11.44□□□□□ -0.58
UBXN1-218ENST00000616865 TRBV7-1A0A0A6YYK4 115 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 FAM24AA6NFZ4 105 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 P2RY1P47900 373 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 MFAP4P55083 255 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 Q56UQ5 140 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 FAM209BQ5JX69 171 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 UBAC2Q8NBM4 344 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
UBXN1-218ENST00000616865 LYRM2Q9NU23 88 aaPredicted RBP11.43□□□□□ -0.58
UBXN1-218ENST00000616865 KLK9Q9UKQ9 250 aa11.43□□□□□ -0.58
UBXN1-218ENST00000616865 FXYD6-FXYD2A0A087WZ82 144 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 ANKRD34BA5PLL1 514 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 MFSD2BA6NFX1 497 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 H0YIZ8 118 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 SLC25A4P12235 298 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 MYOZ3Q8TDC0 251 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 TMEM170AQ8WVE7 144 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 RNF126Q9BV68 326 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 GNB4Q9HAV0 340 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
UBXN1-218ENST00000616865 C21orf62Q9NYP8 219 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 DNAH7Q8WXX0 4024 aa11.42□□□□□ -0.58
UBXN1-218ENST00000616865 TRAV14DV4A0A0A6YYC5 116 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 I3L2K1 104 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 K7EIM0 57 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 CST7O76096 145 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 LGALS1P09382 135 aaKnown RBP11.41□□□□□ -0.58
UBXN1-218ENST00000616865 GPX4P36969 197 aaPredicted RBP11.41□□□□□ -0.58
UBXN1-218ENST00000616865 NPBWR1P48145 328 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 HBG1P69891 147 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 HBG2P69892 147 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 PVRIGQ6DKI7 326 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 CLEC19AQ6UXS0 136 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 SLC16A13Q7RTY0 426 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 ACY3Q96HD9 319 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 ASCL2Q99929 193 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 C11orf1Q9H5F2 150 aa11.41□□□□□ -0.58
UBXN1-218ENST00000616865 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 GNG7O60262 68 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
UBXN1-218ENST00000616865 SULT1A1P50225 295 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms