RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 A0A1B0GU03 582 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 DUXBA0A1W2PPF3 345 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 CORTO00230 105 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
UPK1A-203ENST00000616789 NXPH3O95157 252 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 SRPXP78539 464 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 TRIQKQ629K1 86 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 TOMM20LQ6UXN7 152 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 LINC00299Q6ZSB3 139 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 CENPSQ8N2Z9 138 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 OR4X1Q8NH49 305 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 DYNLRB2Q8TF09 96 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 NEURL2Q9BR09 285 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
UPK1A-203ENST00000616789 TRAV25A0A0B4J276 109 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 C9orf170A2RU37 121 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 ZNF207O43670 478 aaKnown RBP10.24□□□□□ -0.77
UPK1A-203ENST00000616789 SLC25A6P12236 298 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 ANXA3P12429 323 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 SUB1P53999 127 aaKnown RBP eCLIP10.24□□□□□ -0.77
UPK1A-203ENST00000616789 UBE2MP61081 183 aaKnown RBP10.24□□□□□ -0.77
UPK1A-203ENST00000616789 CNPY1Q3B7I2 92 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 FAM90A2PQ658T7 463 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 PRSS54Q6PEW0 395 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 DUSP18Q8NEJ0 188 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 RBKSQ9H477 322 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 SMPXQ9UHP9 88 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 U3KQK5 164 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 STARD9Q9P2P6 4700 aa10.24□□□□□ -0.77
UPK1A-203ENST00000616789 LINC00854A0A1B0GVQ3 168 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 CHEK1O14757 476 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 TSPAN4O14817 238 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 GNG7O60262 68 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 CLN5O75503 358 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 VAMP1P23763 118 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 NPBWR1P48145 328 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 CD81P60033 236 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 RELQ04864 619 aaPredicted RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 TMEM116Q8NCL8 245 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 SLC24A4Q8NFF2 622 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 RNASEH2CQ8TDP1 164 aaKnown RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 C20orf24Q9BUV8 137 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 HEYLQ9NQ87 328 aaPredicted RBP10.23□□□□□ -0.77
UPK1A-203ENST00000616789 CACFD1Q9UGQ2 172 aa10.23□□□□□ -0.77
UPK1A-203ENST00000616789 IGHV7-4-1A0A0J9YVY3 117 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 CEBPZOSA8MTT3 80 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 MPTX1A8MV57 137 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 APOHP02749 345 aaPredicted RBP10.22□□□□□ -0.77
UPK1A-203ENST00000616789 OPRK1P41145 380 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 GUCA2BQ16661 112 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 HAGHQ16775 308 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 RNF2Q99496 336 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 TMED3Q9Y3Q3 217 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 U3KQ87 197 aa10.22□□□□□ -0.77
UPK1A-203ENST00000616789 OR4E1P0C645 316 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 IGLC1P0CG04 106 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 ANXA7P20073 488 aaKnown RBP10.21□□□□□ -0.78
UPK1A-203ENST00000616789 NPY1RP25929 384 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 DHRS2Q13268 280 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 GGNBP1Q5YKI7 109 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 ZNF600Q6ZNG1 722 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 DTD1Q8TEA8 209 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 RHPN1-AS1Q9BWJ2 59 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 HIPK2Q9H2X6 1198 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 VSIRQ9H7M9 311 aa10.21□□□□□ -0.78
UPK1A-203ENST00000616789 PUS1Q9Y606 427 aaKnown RBP eCLIP10.21□□□□□ -0.78
UPK1A-203ENST00000616789 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 OR11H12B2RN74 326 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 ADAP1O75689 374 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 HOXB5P09067 269 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 WWC2-AS2Q96NR7 200 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
UPK1A-203ENST00000616789 RYR3Q15413 4870 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 IGHV3-49A0A0A0MS15 119 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 CENPXA8MT69 81 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 PRSS46E5RG02 174 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 LYRM1O43325 122 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 YIF1AO95070 293 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 SLC25A4P12235 298 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 ID3Q02535 119 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 TIGITQ495A1 244 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 LYG2Q86SG7 212 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 SPAG8Q99932 426 aaPredicted RBP10.19□□□□□ -0.78
UPK1A-203ENST00000616789 CCDC32Q9BV29 185 aa10.19□□□□□ -0.78
UPK1A-203ENST00000616789 TBC1D24Q9ULP9 559 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms