RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 IGKV1-6A0A0C4DH72 117 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 PTGDSP41222 190 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 LYZP61626 148 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 SAA2-SAA4A0A096LPE2 208 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 A0A0J9YW62 118 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 OR9G9P0C7N8 305 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 DSCR4P56555 118 aaPredicted RBP11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 RAB1CQ92928 201 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 FOXC2Q99958 501 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 IGKV1-39P01597 117 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 IGKV1D-39P04432 117 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 LINC00310P59036 64 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 TRBV20-1A0A075B6N2 111 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 ANOS1P23352 680 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 NTF4P34130 210 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 KIR2DL2P43627 348 aaPredicted RBP11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 EML5Q05BV3 1969 aa11.26□□□□□ -0.61
PPP4R3B-205ENST00000616288 SPTY2D1-AS1A0A0U1RR47 76 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 TWIST1Q15672 202 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 ZNF585BQ52M93 769 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 IFI27L1Q96BM0 104 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 CD40P25942 277 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 ERVK11-1P61568 191 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 SPATA12Q7Z6I5 190 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 DOCK10Q96BY6 2186 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 RPL30P62888 115 aaKnown RBP11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 ZNF766Q5HY98 468 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 FAM168AQ92567 244 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 IL23AQ9NPF7 189 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
PPP4R3B-205ENST00000616288 K7EMI3 77 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 NKX2-8O15522 239 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 AREGP15514 252 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 ZNF718Q3SXZ3 478 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 INO80CQ6PI98 192 aaPredicted RBP11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 TMEM164Q5U3C3 297 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 MBNL2Q5VZF2 373 aaKnown RBP11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 RBP4P02753 201 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 COL9A1P20849 921 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 RAC3P60763 192 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 ALKBH6Q3KRA9 238 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 LINC00596Q86U02 117 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 CNEP1R1Q8N9A8 125 aa11.24□□□□□ -0.61
PPP4R3B-205ENST00000616288 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 F8W1H4 67 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 HES1Q14469 280 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 ZNF826PQ6ZT77 177 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 FLVCR1-AS1Q8TAF5 88 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 C12orf77C9JDV5 145 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 DNPH1O43598 174 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 OR11H1Q8NG94 326 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 C15orf62A8K5M9 175 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 SYNGR3O43761 229 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 EFEMP2O95967 443 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 ORM1P02763 201 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 RNF183Q96D59 192 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 GPR82Q96P67 336 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 UTRNP46939 3433 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 TRAV24A0A0B4J272 114 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 TNFRSF4P43489 277 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 OR5AN1Q8NGI8 311 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 CHAC1Q9BUX1 264 aa11.23□□□□□ -0.61
PPP4R3B-205ENST00000616288 C9orf172C9J069 976 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 KIR2DL1P43626 348 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 RND1Q92730 232 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 FAM222BQ8WU58 562 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 OBP2AQ9NY56 170 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 EFNA2O43921 213 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 RPL39P5Q59GN2 51 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 ZGRF1Q86YA3 2104 aa11.22□□□□□ -0.61
PPP4R3B-205ENST00000616288 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 HBDP02042 147 aa11.21□□□□□ -0.61
PPP4R3B-205ENST00000616288 NPIPB3Q92617 1050 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms