RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IFNA4P05014 189 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 HOXA1P49639 335 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 ARRDC1Q8N5I2 433 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 OR52I2Q8NH67 350 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 TMEM231Q9H6L2 316 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 CLN5O75503 358 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 ATG12O94817 140 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 NPPCP23582 126 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 RORCP51449 518 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 SUB1P53999 127 aaKnown RBP eCLIP15.14■□□□□ 0.019e-8■■□□□ 11.8
TRAPPC3-208ENST00000616074 MLANAQ16655 118 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 TRIM16LQ309B1 348 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 SP6Q3SY56 376 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 STHQ8IWL8 128 aa15.14■□□□□ 0.01
TRAPPC3-208ENST00000616074 OPRK1P41145 380 aa15.13■□□□□ 0.01
TRAPPC3-208ENST00000616074 STXBP6Q8NFX7 210 aa15.13■□□□□ 0.01
TRAPPC3-208ENST00000616074 OR4D10Q8NGI6 311 aa15.13■□□□□ 0.01
TRAPPC3-208ENST00000616074 C2CD4CQ8TF44 421 aa15.13■□□□□ 0.01
TRAPPC3-208ENST00000616074 ENY2Q9NPA8 101 aa15.13■□□□□ 0.01
TRAPPC3-208ENST00000616074 COPZ2Q9P299 210 aa15.13■□□□□ 0.01
TRAPPC3-208ENST00000616074 A0A1W2PS18 150 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 K7EQG2 157 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 GIG44P09565 113 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 UCP1P25874 307 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 CRYBB3P26998 211 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 PRR20EP86478 221 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 PRR20CP86479 221 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 PRR20DP86480 221 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 PRR20BP86481 221 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 PRR20AP86496 221 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 BSXQ3C1V8 233 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 MZT2AQ6P582 158 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 TRPT1Q86TN4 253 aaKnown RBP15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 Q8NAQ8 132 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 OR13C8Q8NGS7 320 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 OR4X1Q8NH49 305 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 METTL26Q96S19 204 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 EXTL2Q9UBQ6 330 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 MTFP1Q9UDX5 166 aa15.12■□□□□ 0.01
TRAPPC3-208ENST00000616074 TBPP20226 339 aa15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 RPL5P46777 297 aaKnown RBP15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 P2RY1P47900 373 aa15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 Q6ZRM9 215 aa15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 CCDC71LQ8N9Z2 235 aa15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 TMEM230Q96A57 120 aa15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 RRNAD1Q96FB5 475 aaKnown RBP15.11■□□□□ 0.01
TRAPPC3-208ENST00000616074 IGKV1-17P01599 117 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 ZNF688P0C7X2 276 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 TIGITQ495A1 244 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 SCGB2B2Q4G0G5 96 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 TERB2Q8NHR7 220 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 RNASE11Q8TAA1 199 aaKnown RBP15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 ZFAND1Q8TCF1 268 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 MARCH1Q8TCQ1 289 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 AP3S1Q92572 193 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 GRAMD2BQ96HH9 432 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 ABHD1Q96SE0 405 aa15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 NAA50Q9GZZ1 169 aaKnown RBP15.1■□□□□ 0.01
TRAPPC3-208ENST00000616074 IGHV4-28A0A0C4DH34 117 aa15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 KNCNA6PVL3 124 aa15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 CD74P04233 296 aa15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 RBMY1A1P0DJD3 496 aaKnown RBP15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 RBMY1CP0DJD4 496 aa15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 C4BPBP20851 252 aa15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 RBMY1FQ15415 496 aaKnown RBP15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 DCANP1Q8TF63 244 aa15.09■□□□□ 0.01
TRAPPC3-208ENST00000616074 SCGB2A1O75556 95 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 SPP1P10451 314 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 ZNF182P17025 639 aaPredicted RBP15.08■□□□□ 0
TRAPPC3-208ENST00000616074 TCTAP57738 103 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 TAS2R19P59542 299 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 SPCS3P61009 180 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 CTF1Q16619 201 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 AARDQ4LEZ3 155 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 MORN3Q6PF18 240 aaPredicted RBP15.08■□□□□ 0
TRAPPC3-208ENST00000616074 TMEM229BQ8NBD8 167 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 KRTAP17-1Q9BYP8 105 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 HRH4Q9H3N8 390 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 APLNQ9ULZ1 77 aa15.08■□□□□ 0
TRAPPC3-208ENST00000616074 IGLL5B9A064 214 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 B3GALNT1O75752 331 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 GABARAPO95166 117 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 RAB3DO95716 219 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 OR5AC1P0C628 307 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 TMEM41BQ5BJD5 291 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 LHFPL5Q8TAF8 219 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 NARS2Q96I59 477 aaKnown RBP15.07■□□□□ 0
TRAPPC3-208ENST00000616074 TMEM222Q9H0R3 208 aa15.07■□□□□ 0
TRAPPC3-208ENST00000616074 TRAV30A0A087WSZ9 112 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 ZNF705EA8MWA4 302 aaPredicted RBP15.06■□□□□ 0
TRAPPC3-208ENST00000616074 C11orf94C9JXX5 98 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 CDS2O95674 445 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 MIFP14174 115 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 HTR2BP41595 481 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 ACTL10Q5JWF8 245 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 FAAP20Q6NZ36 180 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 STEAP1BQ6NZ63 245 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 FAM219AQ8IW50 185 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 OR52E5Q8NH55 327 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 CLEC5AQ9NY25 188 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms