RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PSG3Q16557 428 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 LINC00696Q6ZRV3 163 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 TMEM105Q8N8V8 129 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 OR10D3Q8NH80 312 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 DAZAP1Q96EP5 407 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 C5orf30Q96GV9 206 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 ZNF48Q96MX3 618 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 LSM4Q9Y4Z0 139 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 LINC00473A8K010 186 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 F2RL2O00254 374 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 PLP2Q04941 152 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 SRYQ05066 204 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 CD300EQ496F6 205 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 FA2HQ7L5A8 372 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 AMMECR1Q9Y4X0 333 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 WDFY3Q8IZQ1 3526 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 A0A1W2PPM0 123 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 FTH1P19P0C7X4 201 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 HBBP68871 147 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 GRAMD2BQ96HH9 432 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 EML6Q6ZMW3 1958 aa8.54□□□□□ -1.04
TNFAIP3-208ENST00000615468 DYSFO75923 2080 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 DNAJC13O75165 2243 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 CCL3P10147 92 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 GPR12P47775 334 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 CXorf67Q86X51 503 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 NFAM1Q8NET5 270 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 C1QTNF5Q9BXJ0 243 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 C12orf77C9JDV5 145 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 MRPL33O75394 65 aaKnown RBP8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 KLF5Q13887 457 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 MTURNQ8N3F0 131 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 H1FXQ92522 213 aaKnown RBP8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 ICE1Q9Y2F5 2266 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 TRBV6-6A0A0A6YYG2 114 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 SMIM17P0DL12 118 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 LINC00596Q86U02 117 aa8.53□□□□□ -1.04
TNFAIP3-208ENST00000615468 PSMB11A5LHX3 300 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 CFAP161Q6P656 301 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 ACP7Q6ZNF0 438 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 ZNF497Q6ZNH5 498 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 PRDM14Q9GZV8 571 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 PLSCR4Q9NRQ2 329 aa8.52□□□□□ -1.04
TNFAIP3-208ENST00000615468 TRAV3A0A0B4J244 114 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 TMEM30CPA0ZSE6 113 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 ETDBQ3ZM63 59 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 LRRC29Q8WV35 223 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 LY6G6EA0A0G2JKS1 128 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 KLF7O75840 302 aaPredicted RBP8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 TFF1P04155 84 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 RAC3P60763 192 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 Q6ZR03 302 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 URB1-AS1Q96HZ7 61 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 TCF19Q9Y242 345 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 U3KQA8 63 aa8.52□□□□□ -1.05
TNFAIP3-208ENST00000615468 TRAV5A0A0B4J249 113 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 NPIPB11E5RHQ5 1161 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 IGLV2-8P01709 118 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 CSN1S1P47710 185 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 DSCR4P56555 118 aaPredicted RBP8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 RASL11AQ6T310 242 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 MOB3BQ86TA1 216 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 OR2Z1Q8NG97 314 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 IDI2-AS1Q9NZ38 188 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 LOC389332A0A1B0GUA5 103 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 GFRA3O60609 400 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 FAM214BQ7L5A3 538 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 POM121L2Q96KW2 1035 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 A8MWL6 223 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 C21orf140B9A014 251 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 J3QT63 122 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 KLK10O43240 276 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 PLAUP00749 431 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 SP9P0CG40 484 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 GDF1P27539 372 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 OR1C1Q15619 314 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 PRRG4Q9BZD6 226 aa8.51□□□□□ -1.05
TNFAIP3-208ENST00000615468 HCFC1P51610 2035 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 REG1BP48304 166 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 BRWD1-AS2P59051 145 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 GNG5P63218 68 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 TIMM23BQ5SRD1 257 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms