RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 ZNF257Q9Y2Q1 563 aa16.74■□□□□ 0.27
CTDP1-208ENST00000613122 COL5A1-AS1Q5SY13 56 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 NABP1Q96AH0 204 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 SOX21Q9Y651 276 aaPredicted RBP16.73■□□□□ 0.27
CTDP1-208ENST00000613122 SLC25A16P16260 332 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 ZNF324BQ6AW86 544 aaPredicted RBP16.73■□□□□ 0.27
CTDP1-208ENST00000613122 BMPERQ8N8U9 685 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 DNAL4O96015 105 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 TRGV4A0A0C4DH28 118 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 SLC17A3O00476 420 aa16.73■□□□□ 0.27
CTDP1-208ENST00000613122 NHLRC3Q5JS37 347 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 CACNA1GO43497 2377 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 TRAV21A0A0B4J279 112 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 ATP5LO75964 103 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 MALP21145 153 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 TPTE2P1Q5T6R2 138 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 FAM90A9PA6NNJ1 464 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 OOSP1A8MZH6 123 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 MPTX1A8MV57 137 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 UQCR10Q9UDW1 63 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 APOHP02749 345 aaPredicted RBP16.72■□□□□ 0.27
CTDP1-208ENST00000613122 MST1P26927 711 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 HEPN1Q6WQI6 88 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 FAM89BQ8N5H3 189 aa16.72■□□□□ 0.27
CTDP1-208ENST00000613122 MLNRO43193 412 aa16.71■□□□□ 0.27
CTDP1-208ENST00000613122 OR10J3Q5JRS4 329 aa16.71■□□□□ 0.27
CTDP1-208ENST00000613122 CDX1P47902 265 aaPredicted RBP16.71■□□□□ 0.27
CTDP1-208ENST00000613122 TMEM42Q69YG0 159 aa16.71■□□□□ 0.27
CTDP1-208ENST00000613122 H3BUX3 64 aa16.71■□□□□ 0.27
CTDP1-208ENST00000613122 ZNF362Q5T0B9 420 aaPredicted RBP16.71■□□□□ 0.27
CTDP1-208ENST00000613122 BRD3OSQ6XYD6 125 aa16.71■□□□□ 0.27
CTDP1-208ENST00000613122 TRGV11A0A075B6L2 103 aa16.71■□□□□ 0.26
CTDP1-208ENST00000613122 NAT1P18440 290 aa16.71■□□□□ 0.26
CTDP1-208ENST00000613122 SIGLEC15Q6ZMC9 328 aa16.71■□□□□ 0.26
CTDP1-208ENST00000613122 SELLP14151 372 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 GNG5P63218 68 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 SP5Q6BEB4 398 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-208ENST00000613122 SRD5A1P18405 259 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 K7ENP7 123 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 IGHG3P01860 377 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 DOCK6Q96HP0 2047 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 GAGE10A6NGK3 116 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 PRR32B1ATL7 298 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 PSMG4Q5JS54 123 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 LINC01356Q8N9X3 169 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 CRIM1Q9NZV1 1036 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 IGHV1-3A0A0C4DH29 117 aa16.7■□□□□ 0.26
CTDP1-208ENST00000613122 DOCK4Q8N1I0 1966 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 M0R1W7 72 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 DEFB121Q5J5C9 76 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 DTX2Q86UW9 622 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 PMCHL2Q9BQD1 86 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 FBLN7Q53RD9 439 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 BEX4Q9NWD9 120 aaPredicted RBP16.69■□□□□ 0.26
CTDP1-208ENST00000613122 CLPSP04118 112 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 HOXA5P20719 270 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 MDC1Q14676 2089 aaKnown RBP16.69■□□□□ 0.26
CTDP1-208ENST00000613122 OVOL1O14753 267 aa16.69■□□□□ 0.26
CTDP1-208ENST00000613122 A0A087WV48 116 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 TRAV8-6A0A0B4J262 113 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 UBE2DNLQ8IWF7 75 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 GREB1Q4ZG55 1949 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 CRPP02741 224 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 ORMDL3Q8N138 153 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 ST20Q9HBF5 79 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 TMEM50AO95807 157 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 CD33P20138 364 aa16.68■□□□□ 0.26
CTDP1-208ENST00000613122 IGKV1-12A0A0C4DH73 117 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 IGKV1D-12P01611 117 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 C15orf32Q32M92 178 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 MBNL3Q9NUK0 354 aaKnown RBP16.67■□□□□ 0.26
CTDP1-208ENST00000613122 CACNG7P62955 275 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 LOC102724200A0A096LPH7 203 aaPredicted RBP16.67■□□□□ 0.26
CTDP1-208ENST00000613122 CNTFRP26992 372 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 ATOH7Q8N100 152 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 SDHCQ99643 169 aaPredicted RBP16.67■□□□□ 0.26
CTDP1-208ENST00000613122 FOXC2Q99958 501 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 NYNRINQ9P2P1 1898 aaKnown RBP16.67■□□□□ 0.26
CTDP1-208ENST00000613122 CD177Q8N6Q3 437 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 VGLL1Q99990 258 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 EPDR1Q9UM22 224 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 OR10W1Q8NGF6 305 aa16.67■□□□□ 0.26
CTDP1-208ENST00000613122 RNF5Q99942 180 aa16.66■□□□□ 0.26
CTDP1-208ENST00000613122 A0A0A6YYD4 124 aa16.66■□□□□ 0.26
CTDP1-208ENST00000613122 ERVK11-1P61568 191 aa16.66■□□□□ 0.26
CTDP1-208ENST00000613122 IZUMO1RA6ND01 250 aa16.66■□□□□ 0.26
CTDP1-208ENST00000613122 PYYP10082 97 aa16.66■□□□□ 0.26
CTDP1-208ENST00000613122 GAS1P54826 345 aa16.66■□□□□ 0.26
CTDP1-208ENST00000613122 SRSF7Q16629 238 aaKnown RBP eCLIP16.66■□□□□ 0.26
CTDP1-208ENST00000613122 CD55P08174 381 aa16.65■□□□□ 0.26
CTDP1-208ENST00000613122 SRP19P09132 144 aaKnown RBP16.65■□□□□ 0.26
CTDP1-208ENST00000613122 WFDC12Q8WWY7 111 aa16.65■□□□□ 0.26
CTDP1-208ENST00000613122 PSG8Q9UQ74 426 aa16.65■□□□□ 0.26
CTDP1-208ENST00000613122 EFNB1P98172 346 aa16.65■□□□□ 0.26
CTDP1-208ENST00000613122 HEATR5BQ9P2D3 2071 aa16.64■□□□□ 0.26
CTDP1-208ENST00000613122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.64■□□□□ 0.25
CTDP1-208ENST00000613122 J3QRE1 110 aa16.64■□□□□ 0.25
CTDP1-208ENST00000613122 CD5P06127 495 aa16.64■□□□□ 0.25
CTDP1-208ENST00000613122 BPESC1Q9GZL8 116 aa16.64■□□□□ 0.25
CTDP1-208ENST00000613122 HIGD1CA8MV81 97 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms