RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CT45A7P0DMV0 189 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 CT45A1Q5HYN5 189 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 CT45A3Q8NHU0 189 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 P2RX4Q99571 388 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 NUDT16L1Q9BRJ7 211 aaKnown RBP8.99□□□□□ -0.97
FAM3A-221ENST00000612856 MEGF9Q9H1U4 602 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 ZNF331Q9NQX6 463 aaPredicted RBP8.99□□□□□ -0.97
FAM3A-221ENST00000612856 TMEM242Q9NWH2 141 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 J3QR06 171 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 NUDT3O95989 172 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 IGHV3-11P01762 117 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 OR10J4P0C629 311 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 LGALS7P47929 136 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 FXYD3Q14802 87 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 AARDQ4LEZ3 155 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 TPTE2P1Q5T6R2 138 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 DUX4L9Q6RFH8 374 aaPredicted RBP8.99□□□□□ -0.97
FAM3A-221ENST00000612856 LYPD2Q6UXB3 125 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 TMEM56Q96MV1 263 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 ZNF207O43670 478 aaKnown RBP8.98□□□□□ -0.97
FAM3A-221ENST00000612856 ATP5G3P48201 142 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 RSPO1Q2MKA7 263 aaPredicted RBP8.98□□□□□ -0.97
FAM3A-221ENST00000612856 TAF15Q92804 592 aaKnown RBP eCLIP8.98□□□□□ -0.97
FAM3A-221ENST00000612856 RNF2Q99496 336 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 SPRY4Q9C004 299 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 NRN1Q9NPD7 142 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 TNRC6AQ8NDV7 1962 aaKnown RBP8.98□□□□□ -0.97
FAM3A-221ENST00000612856 A0A1B0GW64 132 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 M0R2Z0 102 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 IL6RP08887 468 aaPredicted RBP8.98□□□□□ -0.97
FAM3A-221ENST00000612856 CRYGSP22914 178 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 IGFL3Q6UXB1 125 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 C18orf12Q96KH6 178 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 NAA38Q9BRA0 125 aaKnown RBP8.98□□□□□ -0.97
FAM3A-221ENST00000612856 DSCAMO60469 2012 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 MLNRO43193 412 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 GNG7O60262 68 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 SRIP30626 198 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 OR4D5Q8NGN0 318 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 CHD6Q8TD26 2715 aa8.98□□□□□ -0.97
FAM3A-221ENST00000612856 ITGB1BP1O14713 200 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 USF1P22415 310 aaPredicted RBP8.97□□□□□ -0.97
FAM3A-221ENST00000612856 ACTL10Q5JWF8 245 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 RABAC1Q9UI14 185 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 ZZEF1O43149 2961 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 CGB1A6NKQ9 187 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 F2Z2F3 143 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 ADH4P08319 380 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 SAXO1Q8IYX7 474 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 Q8NFD4 153 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 PKIBQ9C010 78 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 CTXND1A0A1B0GTU2 59 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 S1PR2O95136 353 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 RPP25LQ8N5L8 163 aaKnown RBP8.97□□□□□ -0.97
FAM3A-221ENST00000612856 GCSAMQ8N6F7 178 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 Q8NA96 180 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 ZC2HC1AQ96GY0 325 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 DKK4Q9UBT3 224 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 AMMECR1Q9Y4X0 333 aaPredicted RBP8.97□□□□□ -0.97
FAM3A-221ENST00000612856 COX7A2P2O60397 106 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 SERF2P84101 59 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 NIT1Q86X76 327 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 OR2T6Q8NHC8 308 aa8.97□□□□□ -0.97
FAM3A-221ENST00000612856 IQCF6A8MYZ5 107 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 SELENOTP62341 195 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 RBX1P62877 108 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 GTF2H5Q6ZYL4 71 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 OR1B1Q8NGR6 318 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 SFRP2Q96HF1 295 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 COL12A1Q99715 3063 aa8.96□□□□□ -0.97
FAM3A-221ENST00000612856 KIR2DL5BA0A0G2JN68 375 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 KIR2DL5BA0A0G2JPC4 375 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 FOXH1O75593 365 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 IGKV1D-33P01593 117 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 IGKV1-33P01594 117 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 KCNMB1Q16558 191 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 HIST3H3Q16695 136 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 KIR2DL5AQ8N109 375 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 DRAM1Q8N682 238 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 RAB37Q96AX2 223 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 DAZAP1Q96EP5 407 aaKnown RBP8.96□□□□□ -0.98
FAM3A-221ENST00000612856 CLEC7AQ9BXN2 247 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 C1RLQ9NZP8 487 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 IGKV1D-13A0A0B4J2D9 117 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 IGHV3-66A0A0C4DH42 116 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 IGKV1-13P0DP09 117 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 ZNF841Q6ZN19 808 aa8.96□□□□□ -0.98
FAM3A-221ENST00000612856 GAGE10A6NGK3 116 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 ETV2O00321 342 aaPredicted RBP8.95□□□□□ -0.98
FAM3A-221ENST00000612856 CENPVQ7Z7K6 275 aaPredicted RBP8.95□□□□□ -0.98
FAM3A-221ENST00000612856 ZNF726P1Q15940 193 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 GCSAMLQ5JQS6 135 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 C1orf147Q96MC9 270 aaPredicted RBP8.95□□□□□ -0.98
FAM3A-221ENST00000612856 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
FAM3A-221ENST00000612856 FBXL7Q9UJT9 491 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms