RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MMDQ15546 238 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 Q6ZVH6 145 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 ZADH2Q8N4Q0 377 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 TMEM167BQ9NRX6 74 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 FAM215AQ9Y5M1 114 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 CGB3P0DN86 165 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 CGB7P0DN87 165 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 KIR2DS2P43631 304 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 SLAQ13239 276 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 TMEM183BQ1AE95 376 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 RUSC1-AS1Q66K80 236 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 KIR3DL3Q8N743 410 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 RBMXL3Q8N7X1 1067 aaKnown RBP11.42□□□□□ -0.58
COL6A1-207ENST00000612273 IGFBPL1Q8WX77 278 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 SLC35E1Q96K37 410 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 SLC25A10Q9UBX3 287 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-207ENST00000612273 MAP1AP78559 2803 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-207ENST00000612273 H0Y8G0 127 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 NPSP0C0P6 89 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 BRS3P32247 399 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 RITA1Q96K30 269 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 TXN2Q99757 166 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 FNDC4Q9H6D8 234 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 SAP30LQ9HAJ7 183 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 ZNF331Q9NQX6 463 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 ISLRO14498 428 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 RPL8P62917 257 aaKnown RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 OR1B1Q8NGR6 318 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 TP73-AS1Q9UF72 201 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 AMMECR1Q9Y4X0 333 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 BMPR1BO00238 502 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 LHBP01229 141 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 GPX1P07203 203 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 TAS2R45P59539 299 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 NEU1Q99519 415 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 RPUSD1Q9UJJ7 312 aaKnown RBP11.41□□□□□ -0.58
COL6A1-207ENST00000612273 CDC42EP3Q9UKI2 254 aa11.41□□□□□ -0.58
COL6A1-207ENST00000612273 KIR2DL5BA0A0G2JN68 375 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 KIR2DL5BA0A0G2JPC4 375 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 PAFAH1B2P68402 229 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 ERHP84090 104 aaKnown RBP11.4□□□□□ -0.58
COL6A1-207ENST00000612273 TIMM23BQ5SRD1 257 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 TMEM136Q6ZRR5 245 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 KIR2DL5AQ8N109 375 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 ZNF439Q8NDP4 499 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 CORO2AQ92828 525 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 A0A1W2PS18 150 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-207ENST00000612273 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 APOA2P02652 100 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 ZNF137PP52743 207 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 CX3CL1P78423 397 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 WT1-ASQ06250 92 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 AARDQ4LEZ3 155 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 SPATA45Q537H7 98 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 LBHQ53QV2 105 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-207ENST00000612273 Q56UQ5 140 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 RNASEKQ6P5S7 137 aaKnown RBP11.4□□□□□ -0.58
COL6A1-207ENST00000612273 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
COL6A1-207ENST00000612273 DNAJC4Q9NNZ3 241 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 ARHGAP32A7KAX9 2087 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 MUC6Q6W4X9 2439 aa11.4□□□□□ -0.58
COL6A1-207ENST00000612273 C9JCJ5 164 aa11.4□□□□□ -0.59
COL6A1-207ENST00000612273 APCSP02743 223 aa11.4□□□□□ -0.59
COL6A1-207ENST00000612273 TNFSF4P23510 183 aa11.4□□□□□ -0.59
COL6A1-207ENST00000612273 CD69Q07108 199 aa11.4□□□□□ -0.59
COL6A1-207ENST00000612273 PAXXQ9BUH6 204 aa11.4□□□□□ -0.59
COL6A1-207ENST00000612273 ASCL3Q9NQ33 180 aa11.4□□□□□ -0.59
COL6A1-207ENST00000612273 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 RAB4AP20338 218 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 CD40P25942 277 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 SELENOTP62341 195 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 TMEM249Q2WGJ8 235 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 TCF24Q7RTU0 167 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 ERASQ7Z444 233 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 MCRIP2Q9BUT9 160 aaKnown RBP11.39□□□□□ -0.59
COL6A1-207ENST00000612273 COL12A1Q99715 3063 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 C10orf113Q5VZT2 155 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 MIEN1Q9BRT3 115 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 IGF2RP11717 2491 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
COL6A1-207ENST00000612273 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 Q6ZN92 141 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF788Q6ZQV5 615 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 SLC25A48Q6ZT89 311 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms